5MQL
Crystal structure of dCK mutant C3S in complex with masitinib and UDP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Deoxycytidine kinase | polymer | 289 | 34023.2 | 4 | UniProt (P27707) Pfam (PF01712) In PDB | Homo sapiens (Human) | dCK |
2 | A, B, C, D | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 4 | Chemie (UDP) | |||
3 | A | Masitinib | non-polymer | 498.6 | 1 | Chemie (G65) | |||
4 | B, C | 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE | non-polymer | 307.2 | 2 | Chemie (DCM) | |||
5 | C | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
6 | water | water | 18.0 | 18 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 260 (UniProt: P27707)
PDB | External Database | Details |
---|---|---|
Met -28 | - | initiating methionine |
Ser -27 | - | expression tag |
Tyr -26 | - | expression tag |
Tyr -25 | - | expression tag |
His -24 | - | expression tag |
His -23 | - | expression tag |
His -22 | - | expression tag |
His -21 | - | expression tag |
His -20 | - | expression tag |
His -19 | - | expression tag |
Leu -18 | - | expression tag |
Glu -17 | - | expression tag |
Ser -16 | - | expression tag |
Thr -15 | - | expression tag |
Ser -14 | - | expression tag |
Leu -13 | - | expression tag |
Tyr -12 | - | expression tag |
Lys -11 | - | expression tag |
Lys -10 | - | expression tag |
Ala -9 | - | expression tag |
Gly -8 | - | expression tag |
Leu -7 | - | expression tag |
Glu -6 | - | expression tag |
Asn -5 | - | expression tag |
Leu -4 | - | expression tag |
Tyr -3 | - | expression tag |
Phe -2 | - | expression tag |
Gln -1 | - | expression tag |
Gly 0 | - | expression tag |
Ser 9 | Cys 9 | engineered mutation |
Ser 45 | Cys 45 | engineered mutation |
Ser 59 | Cys 59 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 136092.8 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 2754.0 | |
All* | Total formula weight | 138846.8 |