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5MMM

Structure of the 70S chloroplast ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(0)
50S ribosomal protein L31polymer13014748.21UniProt (A0A0K9R0R6)
Pfam (PF01197)
UniProt (by SIFTS) (P82249)
Spinacia oleracea (Spinach)plastid ribosomal protein bL31c
2B
(1)
50S ribosomal protein L32, chloroplasticpolymer576651.01UniProt (P28804)Spinacia oleracea (Spinach)plastid ribosomal protein bL32c
3C
(2)
50S ribosomal protein L33, chloroplasticpolymer667668.11UniProt (P28805)
Pfam (PF00471)
Spinacia oleracea (Spinach)plastid ribosomal protein bL33c
4D
(3)
50S ribosomal protein L34, chloroplasticpolymer15216126.61UniProt (P82244)
Pfam (PF00468)
Spinacia oleracea (Spinach)plastid ribosomal protein bL34c, CL34
5E
(4)
50S ribosomal protein L35, chloroplasticpolymer15917376.31UniProt (P23326)
Pfam (PF01632)
Spinacia oleracea (Spinach)plastid ribosomal protein bL35c, CL35
6F
(5)
50S ribosomal protein L36, chloroplasticpolymer374414.51UniProt (P12230)
Pfam (PF00444)
Spinacia oleracea (Spinach)plastid ribosomal protein bL36c
7G
(6)
plastid ribosomal protein cL37, PSRP5polymer14215694.81UniProt (A0A0K9S2M7)
UniProt (by SIFTS) (P27684)
Spinacia oleracea (Spinach)
8H
(7)
50S ribosomal protein 6, chloroplasticpolymer11612080.71UniProt (P82411)
Pfam (PF17257)
Spinacia oleracea (Spinach)plastid ribosomal protein cL38, PSRP6, CL25,Plastid-specific 50S ribosomal protein 6,PSRP-6
9I
(A)
23S ribosomal RNApolymer2810911344.31GenBank (7636084)Spinacia oleracea (Spinach)plastid 23S rRNA
10J
(B)
5S ribosomal RNApolymer12139014.21Spinacia oleracea (Spinach)plastid 5S rRNA
11K
(C)
50S ribosomal protein L2, chloroplasticpolymer27229853.61UniProt (P06509)
Pfam (PF00181)
Pfam (PF03947)
Spinacia oleracea (Spinach)plastid ribosomal protein uL2c, Ribosomal protein CS-L4
12L
(D)
plastid ribosomal protein uL3cpolymer30533034.81UniProt (A0A0K9QEC7)
Pfam (PF00297)
UniProt (by SIFTS) (P82191)
Spinacia oleracea (Spinach)
13M
(E)
plastid ribosomal protein uL4cpolymer29332541.61UniProt (A0A0K9RVQ9)
Pfam (PF00573)
UniProt (by SIFTS) (O49937)
Spinacia oleracea (Spinach)
14N
(F)
plastid ribosomal protein uL5cpolymer25828182.71UniProt (A0A0K9RJX4)
Pfam (PF00281)
Pfam (PF00673)
UniProt (by SIFTS) (P82192)
Spinacia oleracea (Spinach)
15O
(G)
plastid ribosomal protein uL6cpolymer22024516.71UniProt (A0A0K9R4N9)
Pfam (PF00347)
UniProt (by SIFTS) (P82193)
Spinacia oleracea (Spinach)
16P
(H)
plastid ribosomal protein bL9cpolymer19622038.91UniProt (A0A0K9RQ91)
Pfam (PF01281)
Pfam (PF03948)
UniProt (by SIFTS) (P82180)
Spinacia oleracea (Spinach)
17Q
(I)
plastid ribosomal protein uL10cpolymer23226128.21UniProt (A0A0K9R3N5)
Pfam (PF00466)
UniProt (by SIFTS) (P82139)
Spinacia oleracea (Spinach)
18R
(J)
50S ribosomal protein L11, chloroplasticpolymer22423690.01UniProt (P31164)
Pfam (PF03946)
Pfam (PF00298)
Spinacia oleracea (Spinach)plastid ribosomal protein uL11c, CL11
19S
(K)
50S ribosomal protein L13, chloroplasticpolymer25028211.61UniProt (P12629)
Pfam (PF00572)
Spinacia oleracea (Spinach)plastid ribosomal protein uL13c, CL13
20T
(L)
50S ribosomal protein L14, chloroplasticpolymer12113484.71UniProt (P09596)
Pfam (PF00238)
Spinacia oleracea (Spinach)Ribosomal protein CS-L29
21U
(M)
plastid ribosomal protein uL15cpolymer27129081.51UniProt (A0A0K9QHT0)
Pfam (PF00828)
UniProt (by SIFTS) (P22798)
Spinacia oleracea (Spinach)
22V
(N)
50S ribosomal protein L16, chloroplasticpolymer13515328.11UniProt (P17353)
Pfam (PF00252)
Spinacia oleracea (Spinach)plastid ribosomal protein uL15c, Ribosomal protein CS-L24
23W
(O)
plastid ribosomal protein uL14cpolymer12614577.21UniProt (A0A0K9RLJ4)
Pfam (PF01196)
UniProt (by SIFTS) (P82194)
Spinacia oleracea (Spinach)
24X
(P)
plastid ribosomal protein uL18cpolymer16618410.21UniProt (A0A0K9QQ60)
Pfam (PF00861)
UniProt (by SIFTS) (P82195)
Spinacia oleracea (Spinach)
25Y
(Q)
50S ribosomal protein L19, chloroplasticpolymer23326121.31UniProt (P82413)
Pfam (PF01245)
Spinacia oleracea (Spinach)plastid ribosomal protein bL19c, CL19
26Z
(R)
50S ribosomal protein L20, chloroplasticpolymer12815725.71UniProt (P28803)
Pfam (PF00453)
Spinacia oleracea (Spinach)plastid ribosomal protein bL20c
27AA
(S)
50S ribosomal protein L21, chloroplasticpolymer25628441.71UniProt (P24613)
Pfam (PF00829)
Spinacia oleracea (Spinach)plastid ribosomal protein bL21c, CL21,CS-L7
28BA
(T)
50S ribosomal protein L22, chloroplasticpolymer19923292.71UniProt (P09594)
Pfam (PF00237)
Spinacia oleracea (Spinach)plastid ribosomal protein uL22c, Ribosomal protein CS-L13
29CA
(U)
50S ribosomal protein L23, chloroplasticpolymer19821832.21UniProt (Q9LWB5)
Pfam (PF00276)
Spinacia oleracea (Spinach)plastid ribosomal protein uL23c, PRPL23
30DA
(V)
plastid ribosomal protein uL24cpolymer19221417.91UniProt (A0A0K9QFU9)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (P27683)
Spinacia oleracea (Spinach)
31EA
(W)
4.5S ribosomal RNApolymer10634334.51GenBank (12299)Spinacia oleracea (Spinach)plastid 4.5S rRNA
32FA
(X)
plastid ribosomal protein bL27cpolymer19421366.41UniProt (A0A0K9R4I2)
Pfam (PF01016)
UniProt (by SIFTS) (P82190)
Spinacia oleracea (Spinach)
33GA
(Y)
plastid ribosomal protein bL28cpolymer14816460.51UniProt (A0A0K9RD02)
Pfam (PF00830)
UniProt (by SIFTS) (P82245)
Spinacia oleracea (Spinach)
34HA
(Z)
plastid ribosomal protein uL29cpolymer16819083.41UniProt (A0A0K9R7W8)
Pfam (PF00831)
UniProt (by SIFTS) (P82248)
Spinacia oleracea (Spinach)
35IA
(z)
tRNA-Phepolymer7624485.51Spinacia oleracea (Spinach)
36JA
(8)
plastid ribosomal protein bS1cpolymer17414826.31Spinacia oleracea (Spinach)
37KA
(a)
16S ribosomal RNApolymer1491483466.51GenBank (7636084)Spinacia oleracea (Spinach)plastid 16S rRNA
38LA
(b)
30S ribosomal protein S2, chloroplasticpolymer23626736.11UniProt (P08242)
Pfam (PF00318)
Spinacia oleracea (Spinach)plastid ribosomal protein uS2c
39MA
(c)
30S ribosomal protein S3, chloroplasticpolymer21824965.21UniProt (P09595)
Pfam (PF00189)
Spinacia oleracea (Spinach)plastid ribosomal protein uS3c
40NA
(d)
30S ribosomal protein S4, chloroplasticpolymer20123454.51UniProt (P13788)
Pfam (PF00163)
Pfam (PF01479)
Spinacia oleracea (Spinach)plastid ribosomal protein uS4c
41OA
(e)
30S ribosomal protein S5, chloroplasticpolymer30833626.41UniProt (Q9ST69)
Pfam (PF00333)
Pfam (PF03719)
Spinacia oleracea (Spinach)plastid ribosomal protein uS5c
42PA
(f)
plastid ribosomal protein bS6cpolymer21123510.71UniProt (A0A0K9R0H2)
Pfam (PF01250)
UniProt (by SIFTS) (P82403)
Spinacia oleracea (Spinach)
43QA
(g)
30S ribosomal protein S7, chloroplasticpolymer15517378.31UniProt (P82129)
Pfam (PF00177)
Spinacia oleracea (Spinach)plastid ribosomal protein uS7c
44RA
(h)
30S ribosomal protein S8, chloroplasticpolymer13415527.31UniProt (P09597)
Pfam (PF00410)
Spinacia oleracea (Spinach)plastid ribosomal protein uS8c
45SA
(i)
plastid ribosomal protein uS9cpolymer20822415.11UniProt (A0A0K9RY17)
Pfam (PF00380)
UniProt (by SIFTS) (P82278)
Spinacia oleracea (Spinach)
46TA
(j)
plastid ribosomal protein uS10cpolymer19521440.51UniProt (A0A0K9RWE7)
Pfam (PF00338)
UniProt (by SIFTS) (P82162)
Spinacia oleracea (Spinach)
47UA
(k)
30S ribosomal protein S11, chloroplasticpolymer13814927.61UniProt (P06506)
Pfam (PF00411)
Spinacia oleracea (Spinach)plastid ribosomal protein uS11c
48VA
(l)
30S ribosomal protein S12, chloroplasticpolymer12313794.31UniProt (P62128)
Pfam (PF00164)
Spinacia oleracea (Spinach)plastid ribosomal protein uS12c
49WA
(m)
plastid ribosomal protein uS13cpolymer17219310.61UniProt (A0A0K9R024)
Pfam (PF00416)
UniProt (by SIFTS) (P82163)
Spinacia oleracea (Spinach)
50XA
(n)
30S ribosomal protein S14, chloroplasticpolymer10011809.81UniProt (P06507)
Pfam (PF00253)
Spinacia oleracea (Spinach)plastid ribosomal protein uS14c
51YA
(o)
30S ribosomal protein S15, chloroplasticpolymer9010778.81UniProt (Q9M3I4)
Pfam (PF00312)
Spinacia oleracea (Spinach)plastid ribosomal protein uS15c
52ZA
(p)
30S ribosomal protein S16, chloroplasticpolymer8810454.21UniProt (P28807)
Pfam (PF00886)
Spinacia oleracea (Spinach)plastid ribosomal protein bS16c
53AB
(q)
plastid ribosomal protein uS17cpolymer16518151.91UniProt (A0A0K9RRR0)
Pfam (PF00366)
UniProt (by SIFTS) (P82137)
Spinacia oleracea (Spinach)
54BB
(r)
30S ribosomal protein S18, chloroplasticpolymer10112079.11UniProt (Q9M3K7)
Pfam (PF01084)
Spinacia oleracea (Spinach)plastid ribosomal protein bS18c
55CB
(s)
30S ribosomal protein S19 alpha, chloroplasticpolymer9210632.51UniProt (P06508)
Pfam (PF00203)
Spinacia oleracea (Spinach)plastid ribosomal protein uS19c, CS-S23
56DB
(t)
plastid ribosomal protein bS20cpolymer18320147.31Spinacia oleracea (Spinach)
57EB
(u)
plastid ribosomal protein bS21cpolymer18020616.21UniProt (A0A0K9RHF9)
Pfam (PF01165)
UniProt (by SIFTS) (P82024)
Spinacia oleracea (Spinach)
58FB
(v)
30S ribosomal protein 2, chloroplasticpolymer26028327.91UniProt (P82277)
Pfam (PF00076)
Spinacia oleracea (Spinach)plastid ribosomal protein cS22, Plastid-specific 30S ribosomal protein 2,PSRP-2
59GB
(w)
30S ribosomal protein 3, chloroplasticpolymer17920312.81UniProt (P82412)
Pfam (PF04839)
Spinacia oleracea (Spinach)Pplastid ribosomal protein cS23, plastid-specific 30S ribosomal protein 3,PSRP-3
60HB
(x)
30S ribosomal protein S31, chloroplasticpolymer10110602.11UniProt (P47910)
Pfam (PF17067)
Spinacia oleracea (Spinach)plastid ribosomal protein bTHXc, Plastid-specific 30S ribosomal protein 4,PSRP-4
61IB
(y)
Ribosome-binding factor PSRP1, chloroplasticpolymer30233799.31UniProt (P19954)
Pfam (PF02482)
Pfam (PF16321)
Spinacia oleracea (Spinach)plastid pY, 30S ribosomal protein 1,CS-S5,CS5,Plastid-specific 30S ribosomal protein 1,PSrp-1,Ribosomal protein 1,S22
62JB, LB
(2, 5)
ZINC IONnon-polymer65.42Chemie (ZN)
63AAA, ABA, AC, ACA, AD...
(a, A, M, P, R...)
MAGNESIUM IONnon-polymer24.3779Chemie (MG)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains61
Total formula weight2599851.4
Non-Polymers*Number of molecules781
Total formula weight19064.4
All*Total formula weight2618915.8
*Water molecules are not included.

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PDB entries from 2024-11-27

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