5MMI
Structure of the large subunit of the chloroplast ribosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | 50S ribosomal protein L31 | polymer | 130 | 14748.2 | 1 | UniProt (A0A0K9R0R6) Pfam (PF01197) UniProt (by SIFTS) (P82249) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL31c |
| 2 | B (1) | 50S ribosomal protein L32, chloroplastic | polymer | 57 | 6651.0 | 1 | UniProt (P28804) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL32c |
| 3 | C (2) | 50S ribosomal protein L33, chloroplastic | polymer | 66 | 7668.1 | 1 | UniProt (P28805) Pfam (PF00471) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL33c |
| 4 | D (3) | 50S ribosomal protein L34, chloroplastic | polymer | 152 | 16126.6 | 1 | UniProt (P82244) Pfam (PF00468) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL34c, CL34 |
| 5 | E (4) | 50S ribosomal protein L35, chloroplastic | polymer | 159 | 17376.3 | 1 | UniProt (P23326) Pfam (PF01632) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL35c, CL35 |
| 6 | F (5) | 50S ribosomal protein L36, chloroplastic | polymer | 37 | 4414.5 | 1 | UniProt (P12230) Pfam (PF00444) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL36c |
| 7 | G (6) | plastid ribosomal protein cL37, PSRP5 | polymer | 142 | 15694.8 | 1 | UniProt (A0A0K9S2M7) UniProt (by SIFTS) (P27684) | Spinacia oleracea (Spinach) | |
| 8 | H (7) | 50S ribosomal protein 6, chloroplastic | polymer | 116 | 12080.7 | 1 | UniProt (P82411) Pfam (PF17257) | Spinacia oleracea (Spinach) | plastid ribosomal protein cL38, PSRP6, CL25,Plastid-specific 50S ribosomal protein 6,PSRP-6 |
| 9 | I (A) | 23S ribosomal RNA | polymer | 2810 | 911344.3 | 1 | GenBank (7636084) | Spinacia oleracea | plastid 23S rRNA |
| 10 | J (B) | 5S ribosomal RNA | polymer | 121 | 39014.2 | 1 | Spinacia oleracea (Spinach) | plastid 5S rRNA | |
| 11 | K (C) | 50S ribosomal protein L2, chloroplastic | polymer | 272 | 29853.6 | 1 | UniProt (P06509) Pfam (PF00181) Pfam (PF03947) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL2c, Ribosomal protein CS-L4 |
| 12 | L (D) | plastid ribosomal protein uL3c | polymer | 305 | 33034.8 | 1 | UniProt (A0A0K9QEC7) Pfam (PF00297) UniProt (by SIFTS) (P82191) | Spinacia oleracea (Spinach) | |
| 13 | M (E) | plastid ribosomal protein uL4c | polymer | 293 | 32541.6 | 1 | UniProt (A0A0K9RVQ9) Pfam (PF00573) UniProt (by SIFTS) (O49937) | Spinacia oleracea (Spinach) | |
| 14 | N (F) | plastid ribosomal protein uL5c | polymer | 258 | 28182.7 | 1 | UniProt (A0A0K9RJX4) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (P82192) | Spinacia oleracea (Spinach) | |
| 15 | O (G) | plastid ribosomal protein uL6c | polymer | 220 | 24516.7 | 1 | UniProt (A0A0K9R4N9) Pfam (PF00347) UniProt (by SIFTS) (P82193) | Spinacia oleracea (Spinach) | |
| 16 | P (H) | plastid ribosomal protein bL9c | polymer | 196 | 22038.9 | 1 | UniProt (A0A0K9RQ91) Pfam (PF01281) Pfam (PF03948) UniProt (by SIFTS) (P82180) | Spinacia oleracea (Spinach) | |
| 17 | Q (I) | plastid ribosomal protein uL10c | polymer | 232 | 26128.2 | 1 | UniProt (A0A0K9R3N5) Pfam (PF00466) UniProt (by SIFTS) (P82139) | Spinacia oleracea (Spinach) | |
| 18 | R (J) | 50S ribosomal protein L11, chloroplastic | polymer | 224 | 23690.0 | 1 | UniProt (P31164) Pfam (PF03946) Pfam (PF00298) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL11c, CL11 |
| 19 | S (K) | 50S ribosomal protein L13, chloroplastic | polymer | 250 | 28211.6 | 1 | UniProt (P12629) Pfam (PF00572) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL13c, CL13 |
| 20 | T (L) | 50S ribosomal protein L14, chloroplastic | polymer | 121 | 13484.7 | 1 | UniProt (P09596) Pfam (PF00238) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL14c, Ribosomal protein CS-L29 |
| 21 | U (M) | plastid ribosomal protein uL15c | polymer | 271 | 29081.5 | 1 | UniProt (A0A0K9QHT0) Pfam (PF00828) UniProt (by SIFTS) (P22798) | Spinacia oleracea (Spinach) | |
| 22 | V (N) | 50S ribosomal protein L16, chloroplastic | polymer | 135 | 15328.1 | 1 | UniProt (P17353) Pfam (PF00252) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL16c, Ribosomal protein CS-L24 |
| 23 | W (O) | plastid ribosomal protein bL17c | polymer | 126 | 14577.2 | 1 | UniProt (A0A0K9RLJ4) Pfam (PF01196) UniProt (by SIFTS) (P82194) | Spinacia oleracea (Spinach) | |
| 24 | X (P) | plastid ribosomal protein uL18c | polymer | 166 | 18410.2 | 1 | UniProt (A0A0K9QQ60) Pfam (PF00861) UniProt (by SIFTS) (P82195) | Spinacia oleracea (Spinach) | |
| 25 | Y (Q) | 50S ribosomal protein L19, chloroplastic | polymer | 233 | 26121.3 | 1 | UniProt (P82413) Pfam (PF01245) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL19c,CL19 |
| 26 | Z (R) | 50S ribosomal protein L20, chloroplastic | polymer | 128 | 15725.7 | 1 | UniProt (P28803) Pfam (PF00453) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL20c |
| 27 | AA (S) | 50S ribosomal protein L21, chloroplastic | polymer | 256 | 28441.7 | 1 | UniProt (P24613) Pfam (PF00829) | Spinacia oleracea (Spinach) | plastid ribosomal protein bL21c, CL21,CS-L7 |
| 28 | BA (T) | 50S ribosomal protein L22, chloroplastic | polymer | 199 | 23292.7 | 1 | UniProt (P09594) Pfam (PF00237) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL22c, Ribosomal protein CS-L13 |
| 29 | CA (U) | 50S ribosomal protein L23, chloroplastic | polymer | 198 | 21832.2 | 1 | UniProt (Q9LWB5) Pfam (PF00276) | Spinacia oleracea (Spinach) | plastid ribosomal protein uL23c, PRPL23 |
| 30 | DA (V) | plastid ribosomal protein uL24c | polymer | 192 | 21417.9 | 1 | UniProt (A0A0K9QFU9) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (P27683) | Spinacia oleracea (Spinach) | |
| 31 | EA (W) | 4.5S ribosomal RNA | polymer | 106 | 34334.5 | 1 | GenBank (12299) | Spinacia oleracea | plastid 4.5S rRNA |
| 32 | FA (X) | plastid ribosomal protein bL27c | polymer | 194 | 21366.4 | 1 | UniProt (A0A0K9R4I2) Pfam (PF01016) UniProt (by SIFTS) (P82190) | Spinacia oleracea (Spinach) | |
| 33 | GA (Y) | plastid ribosomal protein bL28c | polymer | 148 | 16460.5 | 1 | UniProt (A0A0K9RD02) Pfam (PF00830) UniProt (by SIFTS) (P82245) | Spinacia oleracea (Spinach) | |
| 34 | HA (Z) | plastid ribosomal protein uL29c | polymer | 168 | 19083.4 | 1 | UniProt (A0A0K9R7W8) Pfam (PF00831) UniProt (by SIFTS) (P82248) | Spinacia oleracea (Spinach) | |
| 35 | IA (z) | E-site tRNA | polymer | 2 | 589.4 | 1 | Spinacia oleracea (Spinach) | ||
| 36 | JA, LA (2, 5) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 37 | AB, AC, AD, AE, AF... (A, B, V, W, 4...) | MAGNESIUM ION | non-polymer | 24.3 | 501 | Chemie (MG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 35 |
| Total formula weight | 1612864.2 | |
| Non-Polymers* | Number of molecules | 503 |
| Total formula weight | 12307.6 | |
| All* | Total formula weight | 1625171.9 |
