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5MI7

BtGH84 mutant with covalent modification by MA4 in complex with PUGNAc

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AO-GlcNAcase BT_4395polymer72783601.51UniProt (Q89ZI2)
Pfam (PF02838)
Pfam (PF07555)
Pfam (PF21809)
Pfam (PF18344)
In PDB
Bacteroides thetaiotaomicron VPI-5482Beta-N-acetylglucosaminidase,Beta-N-acetylhexosaminidase,Beta-hexosaminidase,Hexosaminidase B,N-acetyl-beta-glucosaminidase
2AO-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATEnon-polymer353.31Chemie (OAN)
3A~{N}-(4-morpholin-4-ylthieno[2,3-d]pyrimidin-2-yl)propanamidenon-polymer292.41Chemie (7NT)
4ACALCIUM IONnon-polymer40.11Chemie (CA)
5waterwater18.0141Chemie (HOH)
Sequence modifications
A: 2 - 716 (UniProt: Q89ZI2)
PDBExternal DatabaseDetails
Met -10-initiating methionine
Gly -9-expression tag
Ser -8-expression tag
Ser -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
Gln 0-expression tag
Trp 1-expression tag
Ser 420Cys 441engineered mutation
Cys 550Tyr 571engineered mutation
Ser 654Cys 675engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight83601.5
Non-Polymers*Number of molecules3
Total formula weight685.8
All*Total formula weight84287.2
*Water molecules are not included.

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PDB entries from 2024-07-17

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