5MFP
Human Sirt6 in complex with activator UBCS58
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | NAD-dependent protein deacetylase sirtuin-6 | polymer | 302 | 33631.6 | 2 | UniProt (Q8N6T7) Pfam (PF02146) In PDB | Homo sapiens (Human) | Regulatory protein SIR2 homolog 6,SIR2-like protein 6 |
| 2 | A, B | [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE | non-polymer | 559.3 | 2 | Chemie (AR6) | |||
| 3 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 4 | A, B | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) | |||
| 5 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 6 | A | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 7 | A, B | 4-pyridin-3-ylpyrrolo[1,2-a]quinoxaline | non-polymer | 245.3 | 2 | Chemie (7M5) | |||
| 8 | B | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 9 | water | water | 18.0 | 178 | Chemie (HOH) |
Sequence modifications
A, B: 8 - 308 (UniProt: Q8N6T7)
| PDB | External Database | Details |
|---|---|---|
| Gly 7 | - | expression tag |
| Ile 8 | Gly 8 | expression tag |
| Asp 9 | Leu 9 | expression tag |
| Pro 10 | Ser 10 | expression tag |
| Phe 11 | Pro 11 | expression tag |
| Thr 12 | Tyr 12 | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 67263.2 | |
| Non-Polymers* | Number of molecules | 21 |
| Total formula weight | 3197.2 | |
| All* | Total formula weight | 70460.4 |
