5M7F
Human porphobilinogen deaminase in complex with DPM cofactor
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Porphobilinogen deaminase | polymer | 365 | 40285.0 | 2 | UniProt (P08397) Pfam (PF01379) Pfam (PF03900) In PDB | Homo sapiens (Human) | PBG-D,Hydroxymethylbilane synthase,HMBS,Pre-uroporphyrinogen synthase |
2 | A, B | 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid | non-polymer | 420.4 | 2 | Chemie (DPM) | |||
3 | A, B | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
4 | water | water | 18.0 | 49 | Chemie (HOH) |
Sequence modifications
A, B: 18 - 361 (UniProt: P08397)
PDB | External Database | Details |
---|---|---|
Met -3 | - | initiating methionine |
Gly -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
His 8 | - | expression tag |
Ser 9 | - | expression tag |
Ser 10 | - | expression tag |
Gly 11 | - | expression tag |
His 12 | - | expression tag |
Ile 13 | - | expression tag |
Glu 14 | - | expression tag |
Gly 15 | - | expression tag |
Arg 16 | - | expression tag |
His 17 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 80570.1 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1417.2 | |
All* | Total formula weight | 81987.3 |