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5M63

Crystal structure of group B Streptococcus type III DP2 oligosaccharide bound to Fab NVS-1-19-5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(H, M)
H chain of Fab NVS-1-19-5polymer24826189.82Oryctolagus cuniculus (Rabbit)
2B, D
(L, N)
L chain of Fab NVS-1-19-5polymer23925175.02Oryctolagus cuniculus (Rabbit)
3E, G
(A, C)
N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranosebranched471.42In PDB
GlyTouCan (G30207PZ)
4F, H
(B, D)
N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[beta-D-galactopyranose-(1-4)-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranosebranched1323.22In PDB
GlyTouCan (G84643HK)
5I, J, K, M, N...
(H, L, M, N)
1,2-ETHANEDIOLnon-polymer62.113Chemie (EDO)
6L, R
(H, M)
(2~{R},3~{R},4~{S},5~{S})-2-[bis(oxidanyl)methyl]-5-(hydroxymethyl)oxolane-3,4-diolnon-polymer180.22Chemie (7GW)
7AA, X, Y, Z
(N, H, L, M)
waterwater18.0134Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight102729.5
BranchedNumber of molecules4
Total formula weight3589.2
Non-Polymers*Number of molecules15
Total formula weight1167.2
All*Total formula weight107485.9
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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