5M63
Crystal structure of group B Streptococcus type III DP2 oligosaccharide bound to Fab NVS-1-19-5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (H, M) | H chain of Fab NVS-1-19-5 | polymer | 248 | 26189.8 | 2 | Oryctolagus cuniculus (Rabbit) | ||
| 2 | B, D (L, N) | L chain of Fab NVS-1-19-5 | polymer | 239 | 25175.0 | 2 | Oryctolagus cuniculus (Rabbit) | ||
| 3 | E, G (A, C) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose | branched | 471.4 | 2 | In PDB GlyTouCan (G30207PZ) | |||
| 4 | F, H (B, D) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[beta-D-galactopyranose-(1-4)-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 1323.2 | 2 | In PDB GlyTouCan (G84643HK) | |||
| 5 | I, J, K, M, N... (H, L, M, N) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 13 | Chemie (EDO) | |||
| 6 | L, R (H, M) | (2~{R},3~{R},4~{S},5~{S})-2-[bis(oxidanyl)methyl]-5-(hydroxymethyl)oxolane-3,4-diol | non-polymer | 180.2 | 2 | Chemie (7GW) | |||
| 7 | AA, X, Y, Z (N, H, L, M) | water | water | 18.0 | 134 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 102729.5 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 3589.2 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1167.2 | |
| All* | Total formula weight | 107485.9 |






