5M1S
Cryo-EM structure of the E. coli replicative DNA polymerase-clamp-exonuclase-theta complex bound to DNA in the editing mode
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA polymerase III subunit alpha | polymer | 927 | 103554.4 | 1 | UniProt (P10443) Pfam (PF02811) Pfam (PF07733) Pfam (PF17657) Pfam (PF14579) In PDB | Escherichia coli K12 | |
2 | B, C | DNA polymerase III subunit beta | polymer | 366 | 40630.5 | 2 | UniProt (P0A988) Pfam (PF00712) Pfam (PF02767) Pfam (PF02768) In PDB | Escherichia coli K12 | Beta sliding clamp,Beta clamp |
3 | D | DNA polymerase III subunit epsilon | polymer | 243 | 27119.0 | 1 | UniProt (P03007) Pfam (PF00929) In PDB | Escherichia coli K12 | |
4 | P | DNA Primer Strand | polymer | 17 | 5275.4 | 1 | synthetic construct | ||
5 | T | DNA Template Strand | polymer | 22 | 6718.3 | 1 | synthetic construct | ||
6 | F | DNA polymerase III subunit theta | polymer | 56 | 6503.4 | 1 | UniProt (P0ABS8) Pfam (PF06440) In PDB | Escherichia coli K12 |
Sequence modifications
A: 1 - 927 (UniProt: P10443)
D: 1 - 243 (UniProt: P03007)
PDB | External Database | Details |
---|---|---|
Leu 921 | Ala 921 | engineered mutation |
Leu 923 | Met 923 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Leu 183 | Thr 183 | engineered mutation |
Leu 185 | Met 185 | engineered mutation |
Pro 186 | Ala 186 | engineered mutation |
Leu 187 | Phe 187 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 230431.6 | |
All* | Total formula weight | 230431.6 |