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5LRY

E coli [NiFe] Hydrogenase Hyd-1 mutant E28D

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(S, T)
Hydrogenase-1 small chainpolymer33536814.72UniProt (P69740)
Pfam (PF01058)
Pfam (PF14720)
UniProt (by SIFTS) (P69739)
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)HYD1,Membrane-bound hydrogenase 1 small subunit,NiFe hydrogenase
2B, D
(L, M)
Hydrogenase-1 large chainpolymer58264769.42UniProt (P0ACD8)
Pfam (PF00374)
Escherichia coli (strain K12)HYD1,Membrane-bound hydrogenase 1 large subunit,NiFe hydrogenase
3E, O
(S, T)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
4F, P
(S, T)
FE3-S4 CLUSTERnon-polymer295.82Chemie (F3S)
5G, Q
(S, T)
FE4-S3 CLUSTERnon-polymer319.62Chemie (SF3)
6H, R
(S, T)
DODECYL-BETA-D-MALTOSIDEnon-polymer510.62Chemie (LMT)
7I, S
(S, T)
CHLORIDE IONnon-polymer35.52Chemie (CL)
8J, K, W
(S, L, M)
SULFATE IONnon-polymer96.13Chemie (SO4)
9L, T
(L, M)
CARBONMONOXIDE-(DICYANO) IRONnon-polymer135.92Chemie (FCO)
10M, U
(L, M)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
11N, V
(L, M)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
12X
(M)
LITHIUM IONnon-polymer6.91Chemie (LI)
13AA, BA, Y, Z
(T, M, S, L)
waterwater18.01428Chemie (HOH)
Sequence modifications
S, T: 1 - 327 (UniProt: P69740)
PDBExternal DatabaseDetails
Arg 328-expression tag
Ser 329-expression tag
His 330-expression tag
His 331-expression tag
His 332-expression tag
His 333-expression tag
His 334-expression tag
His 335-expression tag
L, M: 1 - 582 (UniProt: P0ACD8)
PDBExternal DatabaseDetails
Asp 28Glu 28conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight203168.1
Non-Polymers*Number of molecules20
Total formula weight3759.1
All*Total formula weight206927.1
*Water molecules are not included.

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PDB entries from 2026-01-21

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