5LRT
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP and Phosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Depupylase | polymer | 508 | 57288.3 | 1 | UniProt (A0LU48) Pfam (PF03136) | Acidothermus cellulolyticus (strain ATCC 43068 / 11B) | |
| 2 | B (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 3 | C, D, E, F (A) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 4 | G (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 5 | H (A) | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 1 | Chemie (P6G) | |||
| 6 | I, J (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 2 | Chemie (PGE) | |||
| 7 | K (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 8 | L (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 9 | M (A) | water | water | 18.0 | 224 | Chemie (HOH) |
Sequence modifications
A: 1 - 502 (UniProt: A0LU48)
| PDB | External Database | Details |
|---|---|---|
| Glu 503 | - | expression tag |
| Asn 504 | - | expression tag |
| Leu 505 | - | expression tag |
| Tyr 506 | - | expression tag |
| Phe 507 | - | expression tag |
| Gln 508 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 57288.3 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1331.2 | |
| All* | Total formula weight | 58619.5 |
