5LOM
Crystal structure of the PBP SocA from Agrobacterium tumefaciens C58 in complex with DFG at 1.5 A resolution
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein | polymer | 269 | 29010.6 | 2 | UniProt (Q7D447) Pfam (PF00497) In PDB | Agrobacterium fabrum str. C58 | bacterial periplasmic binding protein SocA |
2 | A, B | Deoxyfructosylglutamine | non-polymer | 308.3 | 2 | Chemie (SNW) | |||
3 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
4 | water | water | 18.0 | 509 | Chemie (HOH) |
Sequence modifications
A, B: 36 - 277 (UniProt: Q7D447)
PDB | External Database | Details |
---|---|---|
Met 15 | - | initiating methionine |
Gly 16 | - | expression tag |
Ser 17 | - | expression tag |
Ser 18 | - | expression tag |
His 19 | - | expression tag |
His 20 | - | expression tag |
His 21 | - | expression tag |
His 22 | - | expression tag |
His 23 | - | expression tag |
His 24 | - | expression tag |
Ser 25 | - | expression tag |
Ser 26 | - | expression tag |
Gly 27 | - | expression tag |
Leu 28 | - | expression tag |
Val 29 | - | expression tag |
Pro 30 | - | expression tag |
Arg 31 | - | expression tag |
Gly 32 | - | expression tag |
Ser 33 | - | expression tag |
His 34 | - | expression tag |
Met 35 | - | expression tag |
His 278 | - | expression tag |
His 279 | - | expression tag |
His 280 | - | expression tag |
His 281 | - | expression tag |
His 282 | - | expression tag |
His 283 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 58021.3 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 802.8 | |
All* | Total formula weight | 58824.1 |