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5LMN

Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1A)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A16S ribosomal RNApolymer1522493958.31GenBank (55771382)Thermus thermophilus HB8
2B30S ribosomal protein S2polymer25629317.71UniProt (P80371)
Pfam (PF00318)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
3C30S ribosomal protein S3polymer23926751.11UniProt (P80372)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
4D30S ribosomal protein S4polymer20924373.41UniProt (P80373)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
5E30S ribosomal protein S5polymer16217583.41UniProt (Q5SHQ5)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
6F30S ribosomal protein S6polymer10111988.81UniProt (Q5SLP8)
Pfam (PF01250)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)TS9
7G30S ribosomal protein S7polymer15618051.01UniProt (P17291)
Pfam (PF00177)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
8H30S ribosomal protein S8polymer13815868.61UniProt (Q5SHQ2)
Pfam (PF00410)
UniProt (by SIFTS) (P0DOY9)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
9I30S ribosomal protein S9polymer12814410.61UniProt (P80374)
Pfam (PF00380)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
10J30S ribosomal protein S10polymer10511955.01UniProt (Q5SHN7)
Pfam (PF00338)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
11K30S ribosomal protein S11polymer12913737.91UniProt (P80376)
Pfam (PF00411)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
12L30S ribosomal protein S12polymer13214637.41UniProt (Q5SHN3)
Pfam (PF00164)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
13M30S ribosomal protein S13polymer12614338.91UniProt (P80377)
Pfam (PF00416)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
14N30S ribosomal protein S14 type Zpolymer617158.71UniProt (Q5SHQ1)
Pfam (PF00253)
UniProt (by SIFTS) (P0DOY6)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
15O30S ribosomal protein S15polymer8910578.41UniProt (Q5SJ76)
Pfam (PF00312)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
16P30S ribosomal protein S16polymer8810410.01UniProt (Q5SJH3)
Pfam (PF00886)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
17Q30S ribosomal protein S17polymer10512325.71UniProt (Q5SHP7)
Pfam (PF00366)
UniProt (by SIFTS) (P0DOY7)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
18R30S ribosomal protein S18polymer8810258.31UniProt (Q5SLQ0)
Pfam (PF01084)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
19S30S ribosomal protein S19polymer9310605.51UniProt (Q5SHP2)
Pfam (PF00203)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
20T30S ribosomal protein S20polymer10611736.11UniProt (P80380)
Pfam (PF01649)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
21V30S ribosomal protein Thxpolymer273350.01UniProt (Q5SIH3)
Pfam (PF17070)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)S31
22WTranslation initiation factor IF-1polymer728247.71UniProt (Q5SHR1)
Pfam (PF01176)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
23XTranslation initiation factor IF-3polymer17119904.41UniProt (Q5SKU2)
Pfam (PF05198)
Pfam (PF00707)
In PDB
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
24YmRNApolymer4213466.01Thermus thermophilus
25A, NMAGNESIUM IONnon-polymer24.3127Chemie (MG)
26D, NZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains24
Total formula weight825012.7
Non-Polymers*Number of molecules129
Total formula weight3217.6
All*Total formula weight828230.2
*Water molecules are not included.

225158

PDB entries from 2024-09-18

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