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5LMG

Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM10 peptide (region 954-970)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA topoisomerase 2-associated protein PAT1polymer36942282.42UniProt (P25644)
Pfam (PF09770)
Saccharomyces cerevisiae (Baker's yeast)Decapping activator and translational repressor PAT1,Topoisomerase II-associated protein PAT1,mRNA turnover protein 1
2C, D
(C, D)
mRNA decapping protein 2polymer141557.82UniProt (B3LNX5)
UniProt (by SIFTS) (P53550)
Saccharomyces cerevisiaeDCP2 decapping factor
3E, F, G, H, I...
(A, B)
1,2-ETHANEDIOLnon-polymer62.113Chemie (EDO)
4N
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5O
(A)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
6T, U
(A, B)
waterwater18.0196Chemie (HOH)
Sequence modifications
A, B: 435 - 796 (UniProt: P25644)
PDBExternal DatabaseDetails
Met 428-initiating methionine
His 429-expression tag
His 430-expression tag
His 431-expression tag
His 432-expression tag
His 433-expression tag
His 434-expression tag
Ala 706Gln 706engineered mutation
Ala 713Leu 713engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight87680.4
Non-Polymers*Number of molecules15
Total formula weight953.3
All*Total formula weight88633.8
*Water molecules are not included.

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PDB entries from 2025-12-24

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