5LKG
Protruding domain of GII.17 norovirus Kawasaki308 in complex with 2-fucosyllactose (2'FL)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Capsid protein VP1 | polymer | 308 | 34315.2 | 2 | UniProt (A0A0E4B1P1) Pfam (PF08435) | Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308 | |
| 2 | C, D (C, D) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | branched | 488.4 | 2 | In PDB GlyTouCan (G94133JU) | |||
| 3 | E, F (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | G, H (A, B) | water | water | 18.0 | 608 | Chemie (HOH) |
Sequence modifications
A, B: 225 - 530 (UniProt: A0A0E4B1P1)
| PDB | External Database | Details |
|---|---|---|
| Gly 223 | - | expression tag |
| Ser 224 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 68630.4 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 976.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 48.6 | |
| All* | Total formula weight | 69655.9 |
