5LCE
Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N-(5-chloro-2-(hydroxymethyl)benzy l)pyrrolidine-2-carboxamide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | L | Prothrombin | polymer | 36 | 4096.5 | 1 | UniProt (P00734) Pfam (PF09396) In PDB | Homo sapiens (Human) | Coagulation factor II, Thrombin light chain |
| 2 | H | Prothrombin | polymer | 259 | 29780.2 | 1 | UniProt (P00734) Pfam (PF00089) In PDB | Homo sapiens (Human) | Coagulation factor II, Thrombin heavy chain |
| 3 | I | Hirudin variant-2 | polymer | 12 | 1548.6 | 1 | UniProt (P09945) In PDB | Hirudo medicinalis | |
| 4 | H | (2~{S})-1-[(2~{R})-2-azanyl-3-cyclohexyl-propanoyl]-~{N}-[[5-chloranyl-2-(hydroxymethyl)phenyl]methyl]pyrrolidine-2-carboxamide | non-polymer | 422.0 | 1 | Chemie (6TH) | |||
| 5 | H | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 6 | H | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 7 | H | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 1 | Chemie (DMS) | |||
| 8 | H | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 9 | H | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 10 | H | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 11 | water | water | 18.0 | 271 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 35425.3 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1200.6 | |
| All* | Total formula weight | 36625.9 |
