5L9O
Crystal structure of Agrobacterium tumefaciens C58 strain PBP SocA in complex with glucopine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein | polymer | 268 | 28879.5 | 2 | UniProt (Q7D447) Pfam (PF00497) | Agrobacterium fabrum (strain C58 / ATCC 33970) | |
| 2 | C, K (A, B) | Glucopine | non-polymer | 310.3 | 2 | Chemie (GOP) | |||
| 3 | D, E, F, G, H... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 10 | Chemie (EDO) | |||
| 4 | J, P (A, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 5 | Q, R (A, B) | water | water | 18.0 | 213 | Chemie (HOH) |
Sequence modifications
A, B: 36 - 277 (UniProt: Q7D447)
| PDB | External Database | Details |
|---|---|---|
| Gly 16 | - | expression tag |
| Ser 17 | - | expression tag |
| Ser 18 | - | expression tag |
| His 19 | - | expression tag |
| His 20 | - | expression tag |
| His 21 | - | expression tag |
| His 22 | - | expression tag |
| His 23 | - | expression tag |
| His 24 | - | expression tag |
| Ser 25 | - | expression tag |
| Ser 26 | - | expression tag |
| Gly 27 | - | expression tag |
| Leu 28 | - | expression tag |
| Val 29 | - | expression tag |
| Pro 30 | - | expression tag |
| Arg 31 | - | expression tag |
| Gly 32 | - | expression tag |
| Ser 33 | - | expression tag |
| His 34 | - | expression tag |
| Met 35 | - | expression tag |
| His 278 | - | expression tag |
| His 279 | - | expression tag |
| His 280 | - | expression tag |
| His 281 | - | expression tag |
| His 282 | - | expression tag |
| His 283 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 57758.9 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1321.4 | |
| All* | Total formula weight | 59080.3 |






