5L8W
Structure of USP12-UB-PRG/UAF1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ubiquitin carboxyl-terminal hydrolase 12 | polymer | 376 | 43742.6 | 1 | UniProt (O75317) Pfam (PF00443) | Homo sapiens (Human) | Deubiquitinating enzyme 12,Ubiquitin thioesterase 12,Ubiquitin-hydrolyzing enzyme 1,Ubiquitin-specific-processing protease 12 |
| 2 | B (B) | WD repeat-containing protein 48 | polymer | 580 | 65194.8 | 1 | UniProt (Q8TAF3) Pfam (PF00400) Pfam (PF11816) | Homo sapiens (Human) | USP1-associated factor 1,WD repeat endosomal protein,p80 |
| 3 | C (C) | Polyubiquitin-B | polymer | 75 | 8519.8 | 1 | UniProt (P0CG47) Pfam (PF00240) | Homo sapiens (Human) | |
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 5 | E (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 6 | F (C) | prop-2-en-1-amine | non-polymer | 57.1 | 1 | Chemie (AYE) | Homo sapiens (Human) | ||
| 7 | G, H, I (A, B, C) | water | water | 18.0 | 18 | Chemie (HOH) |
Sequence modifications
A: 1 - 370 (UniProt: O75317)
B: 9 - 580 (UniProt: Q8TAF3)
| PDB | External Database | Details |
|---|---|---|
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Trp 1 | - | expression tag |
| Ser 2 | - | expression tag |
| His 3 | - | expression tag |
| Pro 4 | - | expression tag |
| Gln 5 | - | expression tag |
| Phe 6 | - | expression tag |
| Glu 7 | - | expression tag |
| Lys 8 | - | expression tag |
| Phe 369 | Leu 369 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 117457.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 214.6 | |
| All* | Total formula weight | 117671.8 |






