5KXD
Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 6.5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Wisteria floribunda agglutinin | polymer | 243 | 26693.5 | 4 | Pfam (PF00139) UniProt (by SIFTS) (A0A1D5B396) | Wisteria floribunda | |
| 2 | E, G (E, G) | alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 2 | In PDB GlyTouCan (G80587NA) | |||
| 3 | F (F) | beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1189.1 | 1 | In PDB GlyTouCan (G26295XE) | |||
| 4 | H, M, Q, V (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 5 | I, N, R, W (A, B, C, D) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 6 | J, O, S, T, X... (A, B, C, D) | ACETATE ION | non-polymer | 59.0 | 6 | Chemie (ACT) | |||
| 7 | K, P, U, Z (A, B, C, D) | ~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide | non-polymer | 545.5 | 4 | Chemie (6Y2) | |||
| 8 | L (B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 9 | AA, BA, CA, DA (A, B, C, D) | water | water | 18.0 | 637 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 106773.8 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1923.8 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 3137.5 | |
| All* | Total formula weight | 111835.1 |
