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5KXC

Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 8.5.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Wisteria floribunda agglutininpolymer24326694.44Pfam (PF00139)
UniProt (by SIFTS) (A0A1D5B395)
Wisteria floribunda
2E
(E)
alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched367.31In PDB
GlyTouCan (G80587NA)
3F
(F)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched732.71In PDB
GlyTouCan (G18638YB)
4G, K, N, R
(A, B, C, D)
~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamidenon-polymer545.54Chemie (6Y2)
5H, L, O, S
(A, B, C, D)
CALCIUM IONnon-polymer40.14Chemie (CA)
6I, M, P, T
(A, B, C, D)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
7J, Q
(B, D)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
8U, V, W, X
(A, B, C, D)
waterwater18.0654Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight106777.8
BranchedNumber of molecules2
Total formula weight1100.0
Non-Polymers*Number of molecules14
Total formula weight3004.5
All*Total formula weight110882.2
*Water molecules are not included.

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PDB entries from 2024-10-30

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