5KS9
Bel502-DQ8-glia-alpha1 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | HLA class II histocompatibility antigen, DQ alpha 1 chain | polymer | 192 | 21882.2 | 2 | UniProt (Q30063) Pfam (PF00993) Pfam (PF07654) UniProt (by SIFTS) (L8E864) | Homo sapiens (Human) | |
| 2 | B, D (B, D) | HLA class II histocompatibility antigen, DQ beta 1 chain | polymer | 230 | 26198.9 | 2 | UniProt (U3PYM0) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (R9XSW3) UniProt (by SIFTS) (A0A0U5Q247) | Triticum aestivum | MHC class II antigen DQB1 |
| 3 | E, G (E, G) | Bel502 TCR alpha TRAV20*01 | polymer | 207 | 22984.5 | 2 | Pfam (PF07686) Pfam (PF09291) UniProt (by SIFTS) (A0A0B4J274) UniProt (by SIFTS) (P01848) | Homo sapiens | |
| 4 | F, H (F, H) | Bel502 TCR beta TRBV9*01 | polymer | 242 | 27233.2 | 2 | Pfam (PF07686) Pfam (PF07654) UniProt (by SIFTS) (A0A580) UniProt (by SIFTS) (A0A5B9) | Homo sapiens | |
| 5 | I, J (I, J) | DQ8-glia-alpha1 peptide | polymer | 16 | 1659.7 | 2 | UniProt (by SIFTS) (P18573) | Triticum aestivum | |
| 6 | K, M, N, P (A, B, C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 7 | L, O, Q, R (A, C, E, G) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 8 | AA, BA, S, T, U... (I, J, A, B, C...) | water | water | 18.0 | 692 | Chemie (HOH) |
Sequence modifications
A, C: -1 - 181 (UniProt: Q30063)
B, D: -29 - -14 (PDB: 5KS9)
B, D: 1 - 192 (UniProt: U3PYM0)
| PDB | External Database | Details |
|---|---|---|
| Thr 182 | - | expression tag |
| Ser 183 | - | expression tag |
| Gly 184 | - | expression tag |
| Asp 185 | - | expression tag |
| Asp 186 | - | expression tag |
| Asp 187 | - | expression tag |
| Asp 188 | - | expression tag |
| Lys 189 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser -13 | - | linker |
| Gly -12 | - | linker |
| Gly -11 | - | linker |
| Ser -10 | - | linker |
| Ile -9 | - | linker |
| Glu -8 | - | linker |
| Gly -7 | - | linker |
| Arg -6 | - | linker |
| Gly -5 | - | linker |
| Gly -4 | - | linker |
| Ser -3 | - | linker |
| Gly -2 | - | linker |
| Ala -1 | - | linker |
| Ser 0 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Thr 193 | - | expression tag |
| Gly 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Asp 196 | - | expression tag |
| Asp 197 | - | expression tag |
| Asp 198 | - | expression tag |
| Asp 199 | - | expression tag |
| Lys 200 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 199917.2 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1045.1 | |
| All* | Total formula weight | 200962.3 |
