5KKE
Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with CYMAL5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Cytochrome c iso-1 | polymer | 108 | 11999.7 | 1 | UniProt (P00044) Pfam (PF00034) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
| 2 | B (A) | HEME C | non-polymer | 618.5 | 1 | Chemie (HEC) | |||
| 3 | C, D (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 4 | E (A) | 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE | non-polymer | 494.6 | 1 | Chemie (CM5) PubChem (58112563) PubChem (70796429) PubChem (70839941) PubChem (70863059) PubChem (89951995) PubChem (92132104) PubChem (126731025) PubChem (126735874) PubChem (133612054) PubChem (44483217) PubChem (46897875) PubChem (59518660) PubChem (68343857) PubChem (73659147) PubChem (5142094) PubChem (5327073) | |||
| 5 | F (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 6 | G, H (A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) PubChem (753) | |||
| 7 | I (A) | water | water | 18.0 | 79 | Chemie (HOH) |
Sequence modifications
A: -5 - 103 (UniProt: P00044)
| PDB | External Database | Details |
|---|---|---|
| Ala 72 | Lys 78 | engineered mutation |
| Ser 102 | Cys 108 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 11999.7 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1524.8 | |
| All* | Total formula weight | 13524.5 |
