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5KJM

SMYD2 in complex with AZ931

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
N-lysine methyltransferase SMYD2polymer42949343.61UniProt (Q9NRG4)
Pfam (PF00856)
Pfam (PF01753)
Homo sapiens (Human)HSKM-B,Histone methyltransferase SMYD2,Lysine N-methyltransferase 3C,SET and MYND domain-containing protein 2
2B
(A)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
3C
(A)
6-[2-[4-[2-(3,4-dichlorophenyl)ethyl]piperazin-1-yl]phenyl]-~{N}-(3-pyrrolidin-1-ylpropyl)-2~{H}-pyrazolo[3,4-b]pyridine-4-carboxamidenon-polymer606.61Chemie (6TM)
4D, E, F
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
5G
(A)
waterwater18.0276Chemie (HOH)
Sequence modifications
A: 5 - 433 (UniProt: Q9NRG4)
PDBExternal DatabaseDetails
Glu 165Gly 165engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight49343.6
Non-Polymers*Number of molecules5
Total formula weight1201.3
All*Total formula weight50544.8
*Water molecules are not included.

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PDB entries from 2025-08-06

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