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5KJL

SMYD2 in complex with AZ378

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
N-lysine methyltransferase SMYD2polymer42949343.61UniProt (Q9NRG4)
Pfam (PF00856)
Pfam (PF01753)
Homo sapiens (Human)HSKM-B,Histone methyltransferase SMYD2,Lysine N-methyltransferase 3C,SET and MYND domain-containing protein 2
2B
(A)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
3C, D, E
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
4F
(A)
waterwater18.0133Chemie (HOH)
Sequence modifications
A: 5 - 433 (UniProt: Q9NRG4)
PDBExternal DatabaseDetails
Glu 165Gly 165engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight49343.6
Non-Polymers*Number of molecules4
Total formula weight594.7
All*Total formula weight49938.2
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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