5KEW
Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt taurodeoxycholate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | VtrA Protein | polymer | 94 | 10982.5 | 3 | UniProt (Q87GI4) Pfam (PF22100) | Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) | |
| 2 | B, D, F (B, D, F) | VtrC Protein | polymer | 144 | 16918.8 | 3 | UniProt (Q87GI3) Pfam (PF22280) | Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) | |
| 3 | G, J, O, R (A, B, D, F) | Taurodeoxycholate | non-polymer | 499.7 | 4 | Chemie (6SB) | |||
| 4 | H, L (A, B) | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 5 | I (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 6 | K, M, N, P, Q (B, C, D, E) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
| 7 | S, T, U, V, W... (A, B, C, D, E...) | water | water | 18.0 | 193 | Chemie (HOH) |
Sequence modifications
A, C, E: 161 - 253 (UniProt: Q87GI4)
B, D, F: 31 - 161 (UniProt: Q87GI3)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| Met -12 | - | initiating methionine |
| Gly -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ser -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Gln -1 | - | expression tag |
| Asp 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 83703.8 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2659.3 | |
| All* | Total formula weight | 86363.1 |
