5KDX
IMPa metallopeptidase in complex with T-antigen
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Metallopeptidase | polymer | 885 | 96379.3 | 2 | UniProt (Q9I5W4) Pfam (PF18650) Pfam (PF18642) Pfam (PF13402) | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | |
| 2 | C, D (C, D) | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose | branched | 383.3 | 2 | In PDB BIRD (PRD_900084) GlyTouCan (G00031MO) | Thomsen-Friedenreich antigen | ||
| 3 | E, F, X, Y, Z (A, B) | PHOSPHATE ION | non-polymer | 95.0 | 5 | Chemie (PO4) | |||
| 4 | AA, G (B, A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 5 | BA, CA, DA, EA, FA... (B, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 26 | Chemie (EDO) | |||
| 6 | MA, W (B, A) | SERINE | non-polymer | 105.1 | 2 | Chemie (SER) | |||
| 7 | NA, OA (A, B) | water | water | 18.0 | 1313 | Chemie (HOH) |
Sequence modifications
A, B: 42 - 923 (UniProt: Q9I5W4)
| PDB | External Database | Details |
|---|---|---|
| Met 41 | - | initiating methionine |
| Leu 924 | - | expression tag |
| Glu 925 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 192758.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 766.7 | |
| Non-Polymers* | Number of molecules | 35 |
| Total formula weight | 2429.6 | |
| All* | Total formula weight | 195954.9 |
