5KDJ
ZmpB metallopeptidase from Clostridium perfringens
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B, A | F5/8 type C domain protein | polymer | 674 | 76227.8 | 2 | UniProt (A0A0H2YN38) Pfam (PF13402) Pfam (PF16403) In PDB | Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) | Metallopeptidase |
2 | B, A | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
3 | B | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
4 | B, A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | water | water | 18.0 | 772 | Chemie (HOH) |
Sequence modifications
B, A: 434 - 1084 (UniProt: A0A0H2YN38)
PDB | External Database | Details |
---|---|---|
Met 411 | - | initiating methionine |
Gly 412 | - | expression tag |
Ser 413 | - | expression tag |
Ser 414 | - | expression tag |
His 415 | - | expression tag |
His 416 | - | expression tag |
His 417 | - | expression tag |
His 418 | - | expression tag |
His 419 | - | expression tag |
His 420 | - | expression tag |
Ser 421 | - | expression tag |
Ser 422 | - | expression tag |
Gly 423 | - | expression tag |
Leu 424 | - | expression tag |
Val 425 | - | expression tag |
Pro 426 | - | expression tag |
Arg 427 | - | expression tag |
Gly 428 | - | expression tag |
Ser 429 | - | expression tag |
His 430 | - | expression tag |
Met 431 | - | expression tag |
Ala 432 | - | expression tag |
Ser 433 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 152455.6 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 338.0 | |
All* | Total formula weight | 152793.6 |