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5K1P

Catalytic domain of polyspecific pyrrolysyl-tRNA synthetase mutant N346A/C348A in complex with AMPPNP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Pyrrolysine--tRNA ligasepolymer27431769.41UniProt (Q8PWY1)
Pfam (PF01409)
Methanosarcina mazeiPyrrolysine--tRNA(Pyl) ligase,Pyrrolysyl-tRNA synthetase,PylRS
2B
(A)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.21Chemie (ANP)
3C, D
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
4E
(A)
waterwater18.0273Chemie (HOH)
Sequence modifications
A: 188 - 454 (UniProt: Q8PWY1)
PDBExternal DatabaseDetails
Met 187-initiating methionine
Ala 346Asn 346engineered mutation
Ala 348Cys 348engineered mutation
His 455-expression tag
His 456-expression tag
His 457-expression tag
His 458-expression tag
His 459-expression tag
His 460-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight31769.4
Non-Polymers*Number of molecules3
Total formula weight554.8
All*Total formula weight32324.2
*Water molecules are not included.

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PDB entries from 2025-12-24

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