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5JPM

Structure of the complex of human complement C4 with MASP-2 rebuilt using iMDFF

Replaces:  4FXG
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, D)
Complement C4-Apolymer65671761.72UniProt (P0C0L4)
Pfam (PF21145)
Pfam (PF01835)
Pfam (PF17791)
Pfam (PF17789)
Pfam (PF07703)
Homo sapiens (Human)Acidic complement C4,C3 and PZP-like alpha-2-macroglobulin domain-containing protein 2
2B, E
(B, E)
Complement C4-Apolymer76784430.22UniProt (P0C0L4)
Pfam (PF01821)
Pfam (PF00207)
Pfam (PF07678)
Pfam (PF22661)
Homo sapiens (Human)Acidic complement C4,C3 and PZP-like alpha-2-macroglobulin domain-containing protein 2
3C, F
(C, F)
Complement C4-Apolymer29133115.62UniProt (P0C0L4)
Pfam (PF07677)
Pfam (PF01759)
Homo sapiens (Human)Acidic complement C4,C3 and PZP-like alpha-2-macroglobulin domain-containing protein 2
4G, I
(G, I)
Mannan-binding lectin serine protease 2polymer15416773.02UniProt (O00187)
Pfam (PF00084)
Homo sapiens (Human)MBL-associated serine protease 2,Mannose-binding protein-associated serine protease 2,MASP-2
5H, J
(H, J)
Mannan-binding lectin serine protease 2polymer24226527.02UniProt (O00187)
Pfam (PF00089)
Homo sapiens (Human)MBL-associated serine protease 2,Mannose-binding protein-associated serine protease 2,MASP-2
6K, L, M, N, O...
(K, L, M, N, O...)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.56In PDB
GlyTouCan (G15407YE)
Sequence modifications
B, E: 680 - 1446 (UniProt: P0C0L4)
PDBExternal DatabaseDetails
Ser 1201Thr 1201variant
G, I: 291 - 444 (UniProt: O00187)
PDBExternal DatabaseDetails
His 298Gln 298engineered mutation
Ala 299Pro 299engineered mutation
H, J: 445 - 686 (UniProt: O00187)
PDBExternal DatabaseDetails
Ala 633Ser 633engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight465214.9
BranchedNumber of molecules6
Total formula weight3519.3
All*Total formula weight468734.2
*Water molecules are not included.

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PDB entries from 2025-06-11

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