5JNB
structure of GLD-2/RNP-8 complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Poly(A) RNA polymerase gld-2 | polymer | 338 | 38746.1 | 4 | UniProt (O17087) Pfam (PF03828) In PDB | Caenorhabditis elegans | Defective in germ line development protein 2 |
2 | E, F, G, H | RNP (RRM RNA binding domain) containing | polymer | 74 | 8439.1 | 4 | UniProt (O61711) In PDB | Caenorhabditis elegans | |
3 | A, B, C, D | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
4 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
5 | A, B, C, D | 1,2-ETHANEDIOL | non-polymer | 62.1 | 9 | Chemie (EDO) | |||
6 | water | water | 18.0 | 130 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 546 - 923 (UniProt: O17087)
PDB | External Database | Details |
---|---|---|
Gly 544 | - | expression tag |
Ala 545 | - | expression tag |
Ala 668 | Asp 426 | engineered mutation |
- | Ala 573 | deletion |
- | Leu 574 | deletion |
- | Ala 575 | deletion |
- | Val 576 | deletion |
- | Arg 577 | deletion |
- | Pro 578 | deletion |
- | Lys 579 | deletion |
- | Ile 580 | deletion |
- | His 581 | deletion |
- | Ser 582 | deletion |
- | Asn 583 | deletion |
- | Ser 584 | deletion |
- | Glu 585 | deletion |
- | Gly 586 | deletion |
- | Asp 587 | deletion |
- | Lys 588 | deletion |
- | Glu 589 | deletion |
- | Thr 590 | deletion |
- | Pro 591 | deletion |
- | Pro 592 | deletion |
- | Pro 593 | deletion |
- | Ser 594 | deletion |
- | Ser 595 | deletion |
- | Ser 596 | deletion |
- | Ala 597 | deletion |
- | Ser 598 | deletion |
- | Thr 599 | deletion |
- | Ser 600 | deletion |
- | Ser 601 | deletion |
- | Ile 602 | deletion |
- | His 603 | deletion |
- | Asn 604 | deletion |
- | Gly 605 | deletion |
- | Gly 606 | deletion |
- | Thr 607 | deletion |
- | Pro 608 | deletion |
- | Gly 609 | deletion |
- | Ile 610 | deletion |
- | Pro 611 | deletion |
- | Met 612 | deletion |
- | His 613 | deletion |
- | His 614 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 188740.9 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 991.5 | |
All* | Total formula weight | 189732.4 |