5JNB
structure of GLD-2/RNP-8 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Poly(A) RNA polymerase gld-2 | polymer | 338 | 38746.1 | 4 | UniProt (O17087) Pfam (PF22600) Pfam (PF03828) | Caenorhabditis elegans | Defective in germ line development protein 2 |
| 2 | E, F, G, H (E, F, G, H) | RNP (RRM RNA binding domain) containing | polymer | 74 | 8439.1 | 4 | UniProt (O61711) | Caenorhabditis elegans | |
| 3 | I, N, S, V (A, B, C, D) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 4 | J, R (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 5 | K, L, M, O, P... (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 9 | Chemie (EDO) | |||
| 6 | AA, BA, CA, DA, X... (D, E, F, G, A...) | water | water | 18.0 | 130 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 546 - 923 (UniProt: O17087)
| PDB | External Database | Details |
|---|---|---|
| Gly 544 | - | expression tag |
| Ala 545 | - | expression tag |
| Ala 668 | Asp 426 | engineered mutation |
| - | Ala 573 | deletion |
| - | Leu 574 | deletion |
| - | Ala 575 | deletion |
| - | Val 576 | deletion |
| - | Arg 577 | deletion |
| - | Pro 578 | deletion |
| - | Lys 579 | deletion |
| - | Ile 580 | deletion |
| - | His 581 | deletion |
| - | Ser 582 | deletion |
| - | Asn 583 | deletion |
| - | Ser 584 | deletion |
| - | Glu 585 | deletion |
| - | Gly 586 | deletion |
| - | Asp 587 | deletion |
| - | Lys 588 | deletion |
| - | Glu 589 | deletion |
| - | Thr 590 | deletion |
| - | Pro 591 | deletion |
| - | Pro 592 | deletion |
| - | Pro 593 | deletion |
| - | Ser 594 | deletion |
| - | Ser 595 | deletion |
| - | Ser 596 | deletion |
| - | Ala 597 | deletion |
| - | Ser 598 | deletion |
| - | Thr 599 | deletion |
| - | Ser 600 | deletion |
| - | Ser 601 | deletion |
| - | Ile 602 | deletion |
| - | His 603 | deletion |
| - | Asn 604 | deletion |
| - | Gly 605 | deletion |
| - | Gly 606 | deletion |
| - | Thr 607 | deletion |
| - | Pro 608 | deletion |
| - | Gly 609 | deletion |
| - | Ile 610 | deletion |
| - | Pro 611 | deletion |
| - | Met 612 | deletion |
| - | His 613 | deletion |
| - | His 614 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 188740.9 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 991.5 | |
| All* | Total formula weight | 189732.4 |
