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5JKD

Crystal structure of human IZUMO1-JUNO complex (crystal form 2)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Izumo sperm-egg fusion protein 1polymer24628163.31UniProt (Q8IYV9)
Pfam (PF15005)
Pfam (PF16706)
Homo sapiens (Human)Oocyte binding/fusion factor,OBF,Sperm-specific protein izumo
2B
(B)
Sperm-egg fusion protein Junopolymer22125428.81UniProt (A6ND01)
Pfam (PF03024)
Homo sapiens (Human)Folate receptor 4,Folate receptor delta,FR-delta,IZUMO1 receptor protein JUNO
3C, D
(A, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
4E
(B)
CHLORIDE IONnon-polymer35.51Chemie (CL)
5F
(A)
waterwater18.03Chemie (HOH)
Sequence modifications
A: 22 - 255 (UniProt: Q8IYV9)
PDBExternal DatabaseDetails
Arg 18-expression tag
Ser 19-expression tag
Pro 20-expression tag
Trp 21-expression tag
Glu 256-expression tag
Phe 257-expression tag
Leu 258-expression tag
Glu 259-expression tag
Val 260-expression tag
Leu 261-expression tag
Phe 262-expression tag
Gln 263-expression tag
B: 20 - 228 (UniProt: A6ND01)
PDBExternal DatabaseDetails
Arg 16-expression tag
Ser 17-expression tag
Pro 18-expression tag
Trp 19-expression tag
Glu 229-expression tag
Phe 230-expression tag
Leu 231-expression tag
Glu 232-expression tag
Val 233-expression tag
Leu 234-expression tag
Phe 235-expression tag
Gln 236-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight53592.2
Non-Polymers*Number of molecules3
Total formula weight477.9
All*Total formula weight54070.0
*Water molecules are not included.

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PDB entries from 2025-07-16

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