5JF0
Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with tripeptide Met-Ala-Arg
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Peptide deformylase | polymer | 204 | 22910.3 | 1 | UniProt (Q8E378) Pfam (PF01327) | Streptococcus agalactiae | PDF,Polypeptide deformylase |
| 2 | B (D) | MET-ALA-ARG | polymer | 3 | 377.5 | 1 | Escherichia coli | ||
| 3 | C (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 4 | D, E, F, G, H... (A) | NICKEL (II) ION | non-polymer | 58.7 | 8 | Chemie (NI) | |||
| 5 | L, M (A, D) | water | water | 18.0 | 351 | Chemie (HOH) |
Sequence modifications
A: 1 - 204 (UniProt: Q8E378)
| PDB | External Database | Details |
|---|---|---|
| Ala 2 | Ser 2 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 23287.8 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 528.6 | |
| All* | Total formula weight | 23816.4 |
