5J2Q
HIV-1 reverse transcriptase in complex with DNA that has incorporated a mismatched EFdA-MP at the N-(pre-translocation) site
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | HIV-1 reverse transcriptase p66 subunit | polymer | 560 | 64521.9 | 1 | UniProt (P04585) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) Pfam (PF00075) | Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) | Pr160Gag-Pol |
| 2 | B (B) | HIV-1 reverse transcriptase p51 domain | polymer | 440 | 51383.0 | 1 | UniProt (P04585) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) | Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) | Pr160Gag-Pol |
| 3 | C (P) | DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(6FM)P*(6FM))-3') | polymer | 22 | 6871.5 | 1 | Human immunodeficiency virus 1 | ||
| 4 | D (T) | DNA (27-MER) | polymer | 27 | 8407.4 | 1 | Human immunodeficiency virus 1 | ||
| 5 | E (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | F, G (P) | 2'-deoxy-4'-ethynyl-2-fluoroadenosine 5'-(dihydrogen phosphate) | non-polymer | 373.2 | 2 | Chemie (6FM) | |||
| 7 | H, I (A, B) | water | water | 18.0 | 3 | Chemie (HOH) |
Sequence modifications
A: 1 - 560 (UniProt: P04585)
B: 1 - 440 (UniProt: P04585)
| PDB | External Database | Details |
|---|---|---|
| Cys 258 | Gln 845 | engineered mutation |
| Ser 280 | Cys 867 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Ser 280 | Cys 867 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 131183.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 770.8 | |
| All* | Total formula weight | 131954.6 |
