5IYX
Crystal structure of the Arabidopsis receptor kinase HAESA in complex with the peptide hormone IDA and the co-receptor SERK1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Receptor-like protein kinase 5 | polymer | 658 | 71675.9 | 1 | UniProt (P47735) Pfam (PF08263) Pfam (PF00560) Pfam (PF13855) In PDB | Arabidopsis thaliana (Mouse-ear cress) | Protein HAESA |
2 | B | Protein IDA | polymer | 14 | 1581.8 | 1 | UniProt (Q8LAD7) In PDB | Arabidopsis thaliana (Mouse-ear cress) | Protein INFLORESCENCE DEFICIENT IN ABSCISSION |
3 | C | Somatic embryogenesis receptor kinase 1 | polymer | 201 | 21751.4 | 1 | UniProt (Q94AG2) Pfam (PF08263) Pfam (PF00560) In PDB | Arabidopsis thaliana (Mouse-ear cress) | AtSERK1,Somatic embryogenesis receptor-like kinase 1 |
4 | D, E, F, G | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
5 | A, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
6 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
7 | water | water | 18.0 | 135 | Chemie (HOH) |
Sequence modifications
A: 20 - 620 (UniProt: P47735)
B: 56 - 69 (UniProt: Q8LAD7)
C: 24 - 213 (UniProt: Q94AG2)
PDB | External Database | Details |
---|---|---|
Gly 15 | - | expression tag |
Ser 16 | - | expression tag |
Ser 17 | - | expression tag |
Met 18 | - | expression tag |
Gly 19 | - | expression tag |
Leu 621 | - | expression tag |
Glu 622 | - | expression tag |
Gly 623 | - | expression tag |
Ser 624 | - | expression tag |
Glu 625 | - | expression tag |
Asn 626 | - | expression tag |
Leu 627 | - | expression tag |
Tyr 628 | - | expression tag |
Phe 629 | - | expression tag |
Gln 630 | - | expression tag |
Gly 631 | - | expression tag |
Ser 632 | - | expression tag |
Ala 633 | - | expression tag |
Trp 634 | - | expression tag |
Ser 635 | - | expression tag |
His 636 | - | expression tag |
Pro 637 | - | expression tag |
Gln 638 | - | expression tag |
Phe 639 | - | expression tag |
Glu 640 | - | expression tag |
Lys 641 | - | expression tag |
Gly 642 | - | expression tag |
Gly 643 | - | expression tag |
Gly 644 | - | expression tag |
Ser 645 | - | expression tag |
Gly 646 | - | expression tag |
Gly 647 | - | expression tag |
Gly 648 | - | expression tag |
Ser 649 | - | expression tag |
Gly 650 | - | expression tag |
Gly 651 | - | expression tag |
Ser 652 | - | expression tag |
Ala 653 | - | expression tag |
Trp 654 | - | expression tag |
Ser 655 | - | expression tag |
His 656 | - | expression tag |
Pro 657 | - | expression tag |
Gln 658 | - | expression tag |
Phe 659 | - | expression tag |
Glu 660 | - | expression tag |
Lys 661 | - | expression tag |
Gly 662 | - | expression tag |
Ala 663 | - | expression tag |
His 664 | - | expression tag |
His 665 | - | expression tag |
His 666 | - | expression tag |
His 667 | - | expression tag |
His 668 | - | expression tag |
His 669 | - | expression tag |
His 670 | - | expression tag |
His 671 | - | expression tag |
His 672 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Tyr 56 | Gly 56 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly 20 | - | expression tag |
Ser 21 | - | expression tag |
Ser 22 | - | expression tag |
Met 23 | - | expression tag |
Asp 115 | Asn 115 | engineered mutation |
Gln 163 | Asn 163 | engineered mutation |
Leu 214 | - | expression tag |
Glu 215 | - | expression tag |
Asn 216 | - | expression tag |
Leu 217 | - | expression tag |
Tyr 218 | - | expression tag |
Phe 219 | - | expression tag |
Gln 220 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 95009.2 | |
Branched | Number of molecules | 4 |
Total formula weight | 1697.6 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1009.0 | |
All* | Total formula weight | 97715.8 |