5INQ
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Ca2+ complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Tyrosyl-DNA phosphodiesterase 2 | polymer | 256 | 28905.2 | 2 | UniProt (Q9JJX7) Pfam (PF03372) | Mus musculus (Mouse) | Tyr-DNA phosphodiesterase 2,5'-tyrosyl-DNA phosphodiesterase,5'-Tyr-DNA phosphodiesterase,TRAF and TNF receptor-associated protein |
| 2 | C, D (C, D) | DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') | polymer | 9 | 2715.8 | 2 | Homo sapiens | ||
| 3 | E, G (A, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 4 | F (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 5 | H (B) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
| 6 | I (B) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 7 | J, K, L, M (A, B, C, D) | water | water | 18.0 | 357 | Chemie (HOH) |
Sequence modifications
A, B: 118 - 370 (UniProt: Q9JJX7)
| PDB | External Database | Details |
|---|---|---|
| Ser 115 | - | expression tag |
| Lys 116 | - | expression tag |
| Gly 117 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 63242.1 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 516.7 | |
| All* | Total formula weight | 63758.7 |
