5II4
Crystal structure of red abalone VERL repeat 1 with linker at 2.0 A resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Maltose-binding periplasmic protein,Vitelline envelope sperm lysin receptor | polymer | 517 | 56604.8 | 1 | UniProt (P0AEY0) UniProt (Q8WR62) Pfam (PF01547) Pfam (PF11386) | Escherichia coli O157:H7 | MBP,MMBP,Maltodextrin-binding protein |
| 2 | B (B) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 342.3 | 1 | In PDB BIRD (PRD_900001) GlyTouCan (G07411ON) | alpha-maltose | ||
| 3 | C, D, E, F, G (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 5 | Chemie (PGE) | Escherichia coli | ||
| 4 | H (A) | water | water | 18.0 | 121 | Chemie (HOH) |
Sequence modifications
A: 3668 - 4034 (UniProt: P0AEY0)
A: 4038 - 4175 (UniProt: Q8WR62)
| PDB | External Database | Details |
|---|---|---|
| Glu 3659 | - | expression tag |
| Thr 3660 | - | expression tag |
| Gly 3661 | - | expression tag |
| His 3662 | - | expression tag |
| His 3663 | - | expression tag |
| His 3664 | - | expression tag |
| His 3665 | - | expression tag |
| His 3666 | - | expression tag |
| His 3667 | - | expression tag |
| Thr 3669 | Ile 28 | engineered mutation |
| Ala 3749 | Asp 108 | engineered mutation |
| Ala 3750 | Lys 109 | engineered mutation |
| Ala 3839 | Glu 198 | engineered mutation |
| Ala 3840 | Asn 199 | engineered mutation |
| His 3882 | Ala 241 | engineered mutation |
| His 3886 | Lys 245 | engineered mutation |
| Ala 3906 | Lys 265 | engineered mutation |
| Val 3979 | Ala 338 | engineered mutation |
| Val 3984 | Ile 343 | engineered mutation |
| Ala 4026 | Glu 385 | engineered mutation |
| Ala 4029 | Lys 388 | engineered mutation |
| Ala 4030 | Asp 389 | engineered mutation |
| Asn 4034 | Arg 393 | engineered mutation |
| Ala 4035 | - | linker |
| Ala 4036 | - | linker |
| Ala 4037 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gln 4115 | Asn 115 | engineered mutation |
| Thr 4122 | Asn 122 | engineered mutation |
| Tyr 4142 | Asn 142 | engineered mutation |
| Gln 4171 | Asn 171 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 56604.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 342.3 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 750.9 | |
| All* | Total formula weight | 57698.0 |
