5IB5
Crystal structure of HLA-B*27:09 complexed with the self-peptide pVIPR and Copper
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, D) | HLA class I histocompatibility antigen, B-27 alpha chain | polymer | 276 | 31951.2 | 2 | UniProt (P03989) Pfam (PF00129) Pfam (PF07654) UniProt (by SIFTS) (P01889) | Homo sapiens (Human) | MHC class I antigen B*27 |
| 2 | B, E (B, E) | Beta-2-microglobulin | polymer | 100 | 11879.4 | 2 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (Human) | |
| 3 | C, F (C, F) | Vasoactive intestinal polypeptide receptor 1 | polymer | 9 | 1399.7 | 2 | UniProt (P32241) | Homo sapiens | VIP-R-1,Pituitary adenylate cyclase-activating polypeptide type II receptor,PACAP-R2,VPAC1 |
| 4 | G, H, I, J, L... (A, C, D, E, F) | COPPER (II) ION | non-polymer | 63.5 | 6 | Chemie (CU) | |||
| 5 | K (D) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 6 | N (F) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 7 | O, P, Q, R, S... (A, B, C, D, E...) | water | water | 18.0 | 195 | Chemie (HOH) |
Sequence modifications
A, D: 1 - 276 (UniProt: P03989)
B, E: 1 - 99 (UniProt: P61769)
| PDB | External Database | Details |
|---|---|---|
| His 116 | Asp 140 | variant |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 90460.5 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 508.8 | |
| All* | Total formula weight | 90969.4 |
