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5I85

aSMase with zinc and phosphocholine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Sphingomyelin phosphodiesterasepolymer58365114.31UniProt (P17405)
Pfam (PF00149)
Pfam (PF19272)
Homo sapiens (Human)Acid sphingomyelinase,aSMase
2B
(B)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
3C
(C)
alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.81In PDB
GlyTouCan (G10756ZZ)
4D
(D)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
5E, F, G
(A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
6H, I
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
7J, K, L, M, N...
(A)
SULFATE IONnon-polymer96.111Chemie (SO4)
8U
(A)
PHOSPHOCHOLINEnon-polymer184.21Chemie (PC)
9V
(A)
waterwater18.0261Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight65114.3
BranchedNumber of molecules3
Total formula weight1921.8
Non-Polymers*Number of molecules17
Total formula weight2035.3
All*Total formula weight69071.3
*Water molecules are not included.

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PDB entries from 2026-01-21

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