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5I3V

Crystal structure of BACE1 in complex with aminoquinoline compound 1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Beta-secretase 1polymer41145822.41UniProt (P56817)
Pfam (PF00026)
Homo sapiens (Human)Aspartyl protease 2,Asp 2,Beta-site amyloid precursor protein cleaving enzyme 1,Beta-site APP cleaving enzyme 1,Memapsin-2,Membrane-associated aspartic protease 2
2B, C, D
(A)
IODIDE IONnon-polymer126.93Chemie (IOD)
3E
(A)
(2R)-3-[2-amino-6-(3-methylpyridin-2-yl)quinolin-3-yl]-N-(3,3-dimethylbutyl)-2-methylpropanamidenon-polymer404.51Chemie (68M)
4F
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
5G
(A)
waterwater18.0454Chemie (HOH)
Sequence modifications
A: -18 - 392 (UniProt: P56817)
PDBExternal DatabaseDetails
Lys -5Arg 56engineered mutation
Lys -4Arg 57engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight45822.4
Non-Polymers*Number of molecules5
Total formula weight877.4
All*Total formula weight46699.8
*Water molecules are not included.

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PDB entries from 2025-07-16

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