5I2B
Crystal structure of a peptide deformylase from Burkholderia ambifaria with actinonin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Peptide deformylase | polymer | 185 | 20902.9 | 1 | UniProt (B1FPK4) | Burkholderia ambifaria IOP40-10 | PDF,Polypeptide deformylase |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | C (A) | ACTINONIN | non-polymer | 385.5 | 1 | Chemie (BB2) PubChem (44344564) PubChem (59891434) PubChem (443600) PubChem (92209716) PubChem (54472722) PubChem (73895485) PubChem (88936994) PubChem (92209715) PubChem (92209717) PubChem (2020) PubChem (6603712) PubChem (10475188) PubChem (161727711) | |||
| 4 | D, E, F, G, H (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 5 | I (A) | water | water | 18.0 | 147 | Chemie (HOH) |
Sequence modifications
A: 1 - 177 (UniProt: B1FPK4)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Ala -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 20902.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 761.2 | |
| All* | Total formula weight | 21664.1 |
