5HRF
The crystal structure of AsfvPolX: DNA5: dGTP ternary complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | DNA polymerase beta-like protein | polymer | 178 | 20609.7 | 2 | UniProt (A0A0A1E3N6) Pfam (PF01909) Pfam (PF14791) UniProt (by SIFTS) (P42494) In PDB | African swine fever virus (ASFV) | PO174L, PolX |
| 2 | C, D | DNA (5'-D(*CP*AP*GP*GP*AP*TP*CP*CP*T*)-3') | polymer | 9 | 2715.8 | 2 | synthetic construct | ||
| 3 | A, B | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 4 | A, B | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (DGT) | |||
| 5 | B, D | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 6 | water | water | 18.0 | 79 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 174 (UniProt: A0A0A1E3N6)
| PDB | External Database | Details |
|---|---|---|
| Ser -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 46651.0 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1316.4 | |
| All* | Total formula weight | 47967.4 |
