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5HN6

Crystal structure of beta-decarboxylating dehydrogenase (TK0280) from Thermococcus kodakarensis complexed with Mn and 3-isopropylmalate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Homoisocitrate dehydrogenasepolymer35338638.01UniProt (Q5JFV8)
Pfam (PF00180)
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
2B
(A)
3-ISOPROPYLMALIC ACIDnon-polymer176.21Chemie (IPM)
3C
(A)
MANGANESE (II) IONnon-polymer54.91Chemie (MN)
4D
(A)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.21Chemie (MPD)
5E
(A)
waterwater18.019Chemie (HOH)
Sequence modifications
A: 1 - 347 (UniProt: Q5JFV8)
PDBExternal DatabaseDetails
His 348-expression tag
His 349-expression tag
His 350-expression tag
His 351-expression tag
His 352-expression tag
His 353-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight38638.0
Non-Polymers*Number of molecules3
Total formula weight349.3
All*Total formula weight38987.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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