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5HJI

Crystal Structure of Pyrococcus abyssi Trm5a complexed with adenosine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
tRNA (guanine(37)-N1)-methyltransferase Trm5apolymer35240758.51UniProt (Q9V2G1)
Pfam (PF18093)
Pfam (PF02475)
Pyrococcus abyssi (strain GE5 / Orsay)M1G-methyltransferase,tRNA [GM37] methyltransferase
2B
(A)
ADENOSINEnon-polymer267.21Chemie (ADN)
3C
(A)
waterwater18.0243Chemie (HOH)
Sequence modifications
A: 1 - 333 (UniProt: Q9V2G1)
PDBExternal DatabaseDetails
Met -18-expression tag
Gly -17-expression tag
Ser -16-expression tag
Ser -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
Leu -8-expression tag
Glu -7-expression tag
Val -6-expression tag
Leu -5-expression tag
Phe -4-expression tag
Gln -3-expression tag
Gly -2-expression tag
Pro -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight40758.5
Non-Polymers*Number of molecules1
Total formula weight267.2
All*Total formula weight41025.8
*Water molecules are not included.

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PDB entries from 2025-07-16

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