5H5U
Mechanistic insights into the alternative translation termination by ArfA and RF2
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | 30S ribosomal protein S20 | polymer | 86 | 9577.3 | 1 | UniProt (P0A7U7) Pfam (PF01649) | Escherichia coli K-12 | |
| 2 | B (2) | 30S ribosomal protein S21 | polymer | 70 | 8392.8 | 1 | UniProt (P68679) Pfam (PF01165) | Escherichia coli K-12 | |
| 3 | C (3) | Alternative ribosome-rescue factor A | polymer | 72 | 8190.4 | 1 | UniProt (P36675) Pfam (PF03889) | Escherichia coli K-12 | ArfA |
| 4 | D (4) | Peptide chain release factor 2 | polymer | 365 | 41300.7 | 1 | UniProt (P07012) Pfam (PF03462) Pfam (PF00472) | Escherichia coli K-12 | RF-2 |
| 5 | E (5) | P-site tRNA | polymer | 76 | 24497.6 | 1 | Escherichia coli | ||
| 6 | F (7) | mRNA | polymer | 6 | 1876.2 | 1 | Escherichia coli | ||
| 7 | G (A) | 23S rRNA | polymer | 2903 | 941305.2 | 1 | GenBank (802133627) | Escherichia coli K-12 | |
| 8 | H (B) | 5S Ribosomal RNA | polymer | 120 | 38790.1 | 1 | GenBank (1063812051) | Escherichia coli K-12 | |
| 9 | I (C) | 50S ribosomal protein L2 | polymer | 272 | 29792.4 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli K-12 | |
| 10 | J (D) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) | Escherichia coli K-12 | |
| 11 | K (E) | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) | Escherichia coli K-12 | |
| 12 | L (F) | 50S ribosomal protein L5 | polymer | 178 | 20202.4 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) | Escherichia coli K-12 | |
| 13 | M (G) | 50S ribosomal protein L6 | polymer | 176 | 18801.6 | 1 | UniProt (P0AG55) Pfam (PF00347) | Escherichia coli K-12 | |
| 14 | N (H) | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) | Escherichia coli K-12 | |
| 15 | O (I) | 50S ribosomal protein L10 | polymer | 164 | 17587.4 | 1 | UniProt (P0A7J3) Pfam (PF00466) | Escherichia coli K-12 | 50S ribosomal protein L8 |
| 16 | P (J) | 50S ribosomal protein L11 | polymer | 141 | 14763.2 | 1 | UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) | Escherichia coli K-12 | |
| 17 | Q (K) | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) | Escherichia coli K-12 | |
| 18 | R (L) | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) Pfam (PF00238) | Escherichia coli K-12 | |
| 19 | S (M) | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) Pfam (PF00828) | Escherichia coli K-12 | |
| 20 | T (N) | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) Pfam (PF00252) | Escherichia coli K-12 | |
| 21 | U (O) | 50S ribosomal protein L17 | polymer | 127 | 14393.7 | 1 | UniProt (P0AG44) Pfam (PF01196) | Escherichia coli K-12 | |
| 22 | V (P) | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) Pfam (PF00861) | Escherichia coli K-12 | |
| 23 | W (Q) | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 1 | UniProt (P0A7K6) Pfam (PF01245) | Escherichia coli K-12 | |
| 24 | X (R) | 50S ribosomal protein L20 | polymer | 117 | 13396.8 | 1 | UniProt (P0A7L3) Pfam (PF00453) | Escherichia coli K-12 | |
| 25 | Y (S) | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (P0AG48) Pfam (PF00829) | Escherichia coli K-12 | |
| 26 | Z (T) | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) | Escherichia coli K-12 | |
| 27 | AA (U) | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (P0ADZ0) Pfam (PF00276) | Escherichia coli K-12 | |
| 28 | BA (V) | 50S ribosomal protein L24 | polymer | 103 | 11208.1 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) | Escherichia coli K-12 | |
| 29 | CA (W) | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli K-12 | |
| 30 | DA (X) | 50S ribosomal protein L27 | polymer | 84 | 9015.3 | 1 | UniProt (P0A7L8) Pfam (PF01016) | Escherichia coli K-12 | |
| 31 | EA (Y) | 50S ribosomal protein L28 | polymer | 77 | 8896.4 | 1 | UniProt (P0A7M2) Pfam (PF00830) | Escherichia coli K-12 | |
| 32 | FA (Z) | 50S ribosomal protein L29 | polymer | 63 | 7286.5 | 1 | UniProt (P0A7M6) Pfam (PF00831) | Escherichia coli K-12 | |
| 33 | GA (a) | 50S ribosomal protein L30 | polymer | 58 | 6423.6 | 1 | UniProt (P0AG51) Pfam (PF00327) | Escherichia coli K-12 | |
| 34 | HA (b) | 50S ribosomal protein L32 | polymer | 56 | 6332.2 | 1 | UniProt (P0A7N4) Pfam (PF01783) | Escherichia coli K-12 | |
| 35 | IA (c) | 50S ribosomal protein L33 | polymer | 54 | 6257.4 | 1 | UniProt (P0A7N9) Pfam (PF00471) | Escherichia coli K-12 | |
| 36 | JA (d) | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) | Escherichia coli K-12 | |
| 37 | KA (e) | 50S ribosomal protein L35 | polymer | 64 | 7181.8 | 1 | UniProt (P0A7Q1) Pfam (PF01632) | Escherichia coli K-12 | Ribosomal protein A |
| 38 | LA (f) | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) | Escherichia coli K-12 | Ribosomal protein B |
| 39 | MA (h) | 16S rRNA | polymer | 1534 | 497221.6 | 1 | GenBank (802133627) | Escherichia coli K-12 | |
| 40 | NA (i) | 30S ribosomal protein S2 | polymer | 240 | 26650.5 | 1 | UniProt (P0A7V0) Pfam (PF00318) | Escherichia coli K-12 | |
| 41 | OA (j) | 30S ribosomal protein S3 | polymer | 232 | 25900.1 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) | Escherichia coli K-12 | |
| 42 | PA (k) | 30S ribosomal protein S4 | polymer | 205 | 23383.0 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) | Escherichia coli K-12 | |
| 43 | QA (l) | 30S ribosomal protein S5 | polymer | 166 | 17498.2 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli K-12 | |
| 44 | RA (m) | 30S ribosomal protein S6 | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli K-12 | |
| 45 | SA (n) | 30S ribosomal protein S7 | polymer | 178 | 19924.0 | 1 | UniProt (P02359) Pfam (PF00177) | Escherichia coli K-12 | |
| 46 | TA (o) | 30S ribosomal protein S8 | polymer | 129 | 14015.4 | 1 | UniProt (P0A7W7) Pfam (PF00410) | Escherichia coli K-12 | |
| 47 | UA (p) | 30S ribosomal protein S9 | polymer | 129 | 14755.1 | 1 | UniProt (P0A7X3) Pfam (PF00380) | Escherichia coli K-12 | |
| 48 | VA (q) | 30S ribosomal protein S10 | polymer | 103 | 11755.6 | 1 | UniProt (P0A7R5) Pfam (PF00338) | Escherichia coli K-12 | |
| 49 | WA (r) | 30S ribosomal protein S11 | polymer | 128 | 13739.8 | 1 | UniProt (P0A7R9) Pfam (PF00411) | Escherichia coli K-12 | |
| 50 | XA (s) | 30S ribosomal protein S12 | polymer | 123 | 13637.0 | 1 | UniProt (P0A7S3) Pfam (PF00164) | Escherichia coli K-12 | |
| 51 | YA (t) | 30S ribosomal protein S13 | polymer | 117 | 12997.3 | 1 | UniProt (P0A7S9) Pfam (PF00416) | Escherichia coli K-12 | |
| 52 | ZA (u) | 30S ribosomal protein S14 | polymer | 100 | 11475.4 | 1 | UniProt (P0AG59) Pfam (PF00253) | Escherichia coli K-12 | |
| 53 | AB (v) | 30S ribosomal protein S15 | polymer | 88 | 10159.6 | 1 | UniProt (P0ADZ4) Pfam (PF00312) | Escherichia coli K-12 | |
| 54 | BB (w) | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (P0A7T3) Pfam (PF00886) | Escherichia coli K-12 | |
| 55 | CB (x) | 30S ribosomal protein S17 | polymer | 83 | 9593.3 | 1 | UniProt (P0AG63) Pfam (PF00366) | Escherichia coli K-12 | |
| 56 | DB (y) | 30S ribosomal protein S18 | polymer | 74 | 8874.3 | 1 | UniProt (P0A7T7) Pfam (PF01084) | Escherichia coli K-12 | |
| 57 | EB (z) | 30S ribosomal protein S19 | polymer | 91 | 10324.2 | 1 | UniProt (P0A7U3) Pfam (PF00203) | Escherichia coli K-12 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 57 |
| Total formula weight | 2233805.8 | |
| All* | Total formula weight | 2233805.8 |
