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5GSD

Crystal structure of LMP2 peptide from EBV in complex with HLA-A*11:01

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
HLA class I histocompatibility antigen, A-11 alpha chainpolymer27531855.11UniProt (P13746)
Pfam (PF00129)
Pfam (PF07654)
UniProt (by SIFTS) (P04439)
Homo sapiens (Human)MHC class I antigen A*11
2B
(B)
Beta-2-microglobulinpolymer9911748.21UniProt (P61769)
Pfam (PF07654)
Homo sapiens (Human)
3C
(C)
Epstein Barr Virus, Latent membrane protein-2 epitopepolymer7721.81UniProt (by SIFTS) (P13285)synthetic construct
4D, E, F, G, H
(A, B)
GLYCEROLnon-polymer92.15Chemie (GOL)
5I, J, K
(A, B, C)
waterwater18.0258Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight44325.1
Non-Polymers*Number of molecules5
Total formula weight460.5
All*Total formula weight44785.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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