5GRO
Crystal structure of the N-terminal anticodon-binding domain of non-discriminating aspartyl-tRNA synthetase from Helicobacter pylori
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Aspartate--tRNA(Asp/Asn) ligase | polymer | 115 | 12897.0 | 2 | UniProt (P56459) Pfam (PF01336) | Helicobacter pylori 26695 | Non-discriminating aspartyl-tRNA synthetase,ND-AspRS,Aspartyl-tRNA synthetase,AspRS |
| 2 | C, F (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 3 | D (B) | butanoic acid | non-polymer | 88.1 | 1 | Chemie (BUA) | |||
| 4 | E (B) | IMIDAZOLE | non-polymer | 69.1 | 1 | Chemie (IMD) | |||
| 5 | G, H (A, B) | water | water | 18.0 | 140 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 104 (UniProt: P56459)
| PDB | External Database | Details |
|---|---|---|
| Met -10 | - | expression tag |
| Ala -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| Val -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Thr 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 25794.0 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 341.4 | |
| All* | Total formula weight | 26135.3 |






