5GQC
Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Lacto-N-biosidase | polymer | 606 | 66090.4 | 8 | UniProt (A0A024QYS6) | Bifidobacterium longum subsp. longum | |
| 2 | I (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 3 | J, K, L, M, N... (B, C, D, E, F...) | CALCIUM ION | non-polymer | 40.1 | 14 | Chemie (CA) | |||
| 4 | AA, BA, CA, DA, EA... (D, E, F, G, H...) | water | water | 18.0 | 1098 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H: 31 - 625 (UniProt: A0A024QYS6)
| PDB | External Database | Details |
|---|---|---|
| Met 30 | - | expression tag |
| Ala 626 | - | expression tag |
| Ala 627 | - | expression tag |
| Leu 628 | - | expression tag |
| Glu 629 | - | expression tag |
| His 630 | - | expression tag |
| His 631 | - | expression tag |
| His 632 | - | expression tag |
| His 633 | - | expression tag |
| His 634 | - | expression tag |
| His 635 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 528723.0 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 584.1 | |
| All* | Total formula weight | 529307.1 |






