5GIJ
Crystal structure of TDR-TDIF complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | B | Leucine-rich repeat receptor-like protein kinase TDR | polymer | 607 | 66735.2 | 1 | UniProt (Q9FII5) Pfam (PF08263) Pfam (PF00560) Pfam (PF13855) In PDB | Arabidopsis thaliana (Mouse-ear cress) | Protein PHLOEM INTERCALATED WITH XYLEM,Tracheary element differentiation inhibitory factor receptor,TDIF receptor |
| 2 | D | Peptide from CLAVATA3/ESR (CLE)-related protein 41 | polymer | 12 | 1280.3 | 1 | UniProt (Q84W98) In PDB | Arabidopsis thaliana | Tracheary element differentiation inhibitory factor-like protein,TDIF-like protein |
| 3 | A | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G62182OO) | |||
| 4 | C, E, F, I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 5 | G | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G04854NQ) | |||
| 6 | H | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G17392HI) | |||
| 7 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence modifications
B: 31 - 631 (UniProt: Q9FII5)
| PDB | External Database | Details |
|---|---|---|
| Ala 259 | Cys 259 | engineered mutation |
| Ser 540 | Cys 540 | engineered mutation |
| Ser 632 | - | expression tag |
| Gly 633 | - | expression tag |
| Leu 634 | - | expression tag |
| Glu 635 | - | expression tag |
| Val 636 | - | expression tag |
| Leu 637 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 68015.5 | |
| Branched | Number of molecules | 7 |
| Total formula weight | 3927.7 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 884.8 | |
| All* | Total formula weight | 72828.0 |
