5GGO
Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GalNac-beta1,3-GlcNAc-beta-pNP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 | polymer | 164 | 17623.0 | 2 | UniProt (Q8WZA1) Pfam (PF15711) In PDB | Homo sapiens (Human) | POMGnT1,UDP-GlcNAc:alpha-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I.2,GnT I.2 |
| 2 | C, D | 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucopyranoside | branched | 545.5 | 2 | In PDB GlyTouCan (G37845PU) | |||
| 3 | B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 4 | water | water | 18.0 | 364 | Chemie (HOH) |
Sequence modifications
A, B: 92 - 250 (UniProt: Q8WZA1)
| PDB | External Database | Details |
|---|---|---|
| Gly 87 | - | expression tag |
| Pro 88 | - | expression tag |
| Leu 89 | - | expression tag |
| Gly 90 | - | expression tag |
| Ser 91 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 35246.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1091.0 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 62.1 | |
| All* | Total formula weight | 36399.1 |
