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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

5GAD

RNC-SRP-SR complex early state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
11ESRP 4.5S RNApolymer11336502.71GenBank (836716955)Escherichia coli
22tRNA CCAendpolymer3894.61Escherichia coli
3A23S rRNApolymer2903941306.21GenBank (170787319)Escherichia coli
4B5S rRNApolymer12038790.11GenBank (817146391)Escherichia coli
5C50S ribosomal protein L2polymer27329923.61UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coliribosomal protein uL2
6D50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coliribosomal protein uL3
7E50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coliribosomal protein uL4
8F50S ribosomal protein L5polymer17920333.61UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coliribosomal protein uL5
9G50S ribosomal protein L6polymer17718932.81UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coliribosomal protein uL6
10H50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF03948)
Pfam (PF01281)
In PDB		Escherichia coli
11I50S ribosomal protein L10polymer16517718.61UniProt (P0A7J3)
Pfam (PF00466)
In PDB		Escherichia coli50S ribosomal protein L8, ribosomal protein uL10
12J50S ribosomal protein L11polymer14214894.41UniProt (P0A7J7)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Escherichia coliribosomal protein uL11
13K50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coliribosomal protein uL13
14L50S ribosomal protein L14polymer12313565.11UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coliribosomal protein uL14
15M50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coliribosomal protein uL15
16N50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coliribosomal protein uL16
17O50S ribosomal protein L17polymer12714393.71UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coliribosomal protein uL17
18P50S ribosomal protein L18polymer11712794.71UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliribosomal protein uL18
19Q50S ribosomal protein L19polymer11513159.31UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliribosomal protein bL19
20R50S ribosomal protein L20polymer11813528.01UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliribosomal protein bL20
21S50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliribosomal protein bL21
22T50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliribosomal protein uL22
23U50S ribosomal protein L23polymer10011222.21UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliribosomal protein uL23
24V50S ribosomal protein L24polymer10411339.31UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coliribosomal protein uL24
25W50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliribosomal protein bL25
26X50S ribosomal protein L27polymer859146.51UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliribosomal protein bL27
27Y50S ribosomal protein L28polymer789027.61UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliribosomal protein bL28
28Z50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliribosomal protein uL29
29a50S ribosomal protein L30polymer596554.81UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliribosomal protein uL30
30b50S ribosomal protein L32polymer576463.41UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coliribosomal protein bL32
31c50S ribosomal protein L33polymer556388.61UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliribosomal protein bL33
32d50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliribosomal protein bL34
33e50S ribosomal protein L35polymer657313.01UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliRibosomal protein A,ribosomal protein bL35
34f50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliRibosomal protein B, ribosomal protein bL36
35iSignal recognition particle protein Ffhpolymer45047823.21Pfam (PF02881)
Pfam (PF00448)
Pfam (PF02978)
UniProt (by SIFTS) (P0AGD7)
In PDB		Escherichia coli
36k1A9L SSpolymer181981.51UniProt (by SIFTS) (P00634)
In PDB		Escherichia coli
37lSignal recognition particle receptor FtsYpolymer49754569.01UniProt (P10121)
Pfam (PF02881)
Pfam (PF00448)
In PDB		Escherichia coliSRP receptor
38A, i, l, B, 2...MAGNESIUM IONnon-polymer24.3433Chemie (MG)
39fZINC IONnon-polymer65.41Chemie (ZN)
40i, lPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.22Chemie (GNP)
Sequence modifications
I: 1 - 165 (UniProt: P0A7J3)
PDBExternal DatabaseDetails
Val 85Ser 85conflict
Thr 86Met 86conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains37
Total formula weight1516740.4
Non-Polymers*Number of molecules436
Total formula weight11633.9
All*Total formula weight1528374.2
*Water molecules are not included.

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PDB entries from 2024-05-01

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