5FY7
Crystal structure of JmjC domain of human histone demethylase UTY in complex with succinate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | HISTONE DEMETHYLASE UTY | polymer | 478 | 55006.4 | 2 | UniProt (O14607) Pfam (PF02373) Pfam (PF21322) Pfam (PF21326) | HOMO SAPIENS (HUMAN) | UBIQUITOUSLY-TRANSCRIBED TPR PROTEIN ON THE Y CHROMOSOME, U BIQUITOUSLY-TRANSCRIBED Y CHROMOSOME TETRATRICOPEPTIDE REPEAT PROTEIN |
| 2 | C, M (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 3 | D, N (A, B) | SUCCINIC ACID | non-polymer | 118.1 | 2 | Chemie (SIN) | |||
| 4 | E, F, G, H, I... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 16 | Chemie (EDO) | |||
| 5 | L, X (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | Y, Z (A, B) | water | water | 18.0 | 745 | Chemie (HOH) |
Sequence modifications
A, B: 799 - 1268 (UniProt: O14607)
| PDB | External Database | Details |
|---|---|---|
| Met 798 | - | expression tag |
| Ala 1269 | - | expression tag |
| Glu 1270 | - | expression tag |
| Asn 1271 | - | expression tag |
| Leu 1272 | - | expression tag |
| Tyr 1273 | - | expression tag |
| Phe 1274 | - | expression tag |
| Gln 1275 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 110012.8 | |
| Non-Polymers* | Number of molecules | 22 |
| Total formula weight | 1470.0 | |
| All* | Total formula weight | 111482.8 |
